RNA–Protein interactions for RNA: ENST00000433272.6

LRIG3-203, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 1 (best)

Gene LRIG3, Length 3,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-203ENST00000433272 SPAG1Q07617 926 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 TPTE2Q6XPS3 522 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
LRIG3-203ENST00000433272 SMARCAL1Q9NZC9 954 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 A0A1B0GTH6 734 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 USP17L3A6NCW0 530 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 USP17L4A6NCW7 530 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 G3V3G9 751 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 PPFIA4O75335 1185 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 RFC4P35249 363 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 GUCY2FP51841 1108 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 CDR1P51861 262 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 USP17L1Q7RTZ2 530 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 SLC51AQ86UW1 340 aa17.66■□□□□ 0.42
LRIG3-203ENST00000433272 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 ZNF512BQ96KM6 892 aaPredicted RBP17.65■□□□□ 0.42
LRIG3-203ENST00000433272 CAPS2Q9BXY5 557 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 B4DLN1 442 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 USO1O60763 962 aaKnown RBP17.65■□□□□ 0.42
LRIG3-203ENST00000433272 ERVK-24P63145 666 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 PICALMQ13492 652 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 CUL4BQ13620 913 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 FAM207AQ9NSI2 230 aaPredicted RBP17.65■□□□□ 0.42
LRIG3-203ENST00000433272 CRYBG1Q9Y4K1 1723 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 KRT83P78385 493 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 CACNA2D4Q7Z3S7 1137 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 TXNRD3Q86VQ6 643 aa17.65■□□□□ 0.42
LRIG3-203ENST00000433272 RNF26Q9BY78 433 aaPredicted RBP17.65■□□□□ 0.42
LRIG3-203ENST00000433272 ADD3Q9UEY8 706 aaKnown RBP17.65■□□□□ 0.42
LRIG3-203ENST00000433272 SRPRBQ9Y5M8 271 aaKnown RBP17.65■□□□□ 0.42
LRIG3-203ENST00000433272 TTC26A0AVF1 554 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 C6orf229H3BNL8 230 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 TICAM2Q86XR7 235 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 FBXL16Q8N461 479 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 TRIML1Q8N9V2 468 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.64■□□□□ 0.41
LRIG3-203ENST00000433272 WNT7AO00755 349 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 LDHBP07195 334 aaKnown RBP17.64■□□□□ 0.41
LRIG3-203ENST00000433272 TBX2Q13207 712 aaPredicted RBP17.64■□□□□ 0.41
LRIG3-203ENST00000433272 PDCLQ13371 301 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 SELENOOQ9BVL4 669 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 ZHX3Q9H4I2 956 aa17.64■□□□□ 0.41
LRIG3-203ENST00000433272 KIF5BP33176 963 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 USP8P40818 1118 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 UBE4AQ14139 1066 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 TADA2BQ86TJ2 420 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 CSGALNACT2Q8N6G5 542 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 GIMAP7Q8NHV1 300 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 DUSP10Q9Y6W6 482 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 INF2Q27J81 1249 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.63■□□□□ 0.41
LRIG3-203ENST00000433272 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
LRIG3-203ENST00000433272 ALS2Q96Q42 1657 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 GOLGA6L10A6NI86 522 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 PP2D1A8MPX8 630 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 MAP2K7O14733 419 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 PSMA7O14818 248 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 KCTD19Q17RG1 926 aaPredicted RBP17.63■□□□□ 0.41
LRIG3-203ENST00000433272 LETM2Q2VYF4 491 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 KRT26Q7Z3Y9 468 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 SRBD1Q8N5C6 995 aaKnown RBP17.63■□□□□ 0.41
LRIG3-203ENST00000433272 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
LRIG3-203ENST00000433272 FAM169AQ9Y6X4 670 aa17.63■□□□□ 0.41
LRIG3-203ENST00000433272 BUB1O43683 1085 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 ZNF18P17022 549 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 RASGRP2Q7LDG7 609 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 USP54Q70EL1 1684 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 SIPA1L3O60292 1781 aaPredicted RBP17.62■□□□□ 0.41
LRIG3-203ENST00000433272 SCG2P13521 617 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 TACC1O75410 805 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 ASIC1P78348 528 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 STAG2Q8N3U4 1231 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 SH2D3CQ8N5H7 860 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
LRIG3-203ENST00000433272 SECISBP2LQ93073 1101 aaKnown RBP17.62■□□□□ 0.41
LRIG3-203ENST00000433272 DCP1AQ9NPI6 582 aaPredicted RBP17.62■□□□□ 0.41
LRIG3-203ENST00000433272 RNF225M0QZC1 329 aaPredicted RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 TUBBP07437 444 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 ESYT3A0FGR9 886 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 HAUS4Q9H6D7 363 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 BSDC1Q9NW68 430 aaPredicted RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 ZNF804BA4D1E1 1349 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 A0A087X0B3 334 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 ACTN4O43707 911 aaKnown RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 CALM1P0DP23 149 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 CALM2P0DP24 149 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 CALM3P0DP25 149 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 TUBB2AQ13885 445 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
LRIG3-203ENST00000433272 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
LRIG3-203ENST00000433272 TUBB2BQ9BVA1 445 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms