RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 XPO4Q9C0E2 1151 aaKnown RBP9.45□□□□□ -0.9
HDAC9-212ENST00000432645 DNAJC18Q9H819 358 aa9.45□□□□□ -0.9
HDAC9-212ENST00000432645 YDJCA8MPS7 323 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 M0R2N6 131 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 TTLL1O95922 423 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 BMP15O95972 392 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 TTBK2Q6IQ55 1244 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 KCTD1Q719H9 257 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
HDAC9-212ENST00000432645 MRFAP1L1Q96HT8 127 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-212ENST00000432645 FAM198AQ9UFP1 575 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 PP2D1A8MPX8 630 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 TRAPPC10P48553 1259 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 LETM2Q2VYF4 491 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 JAKMIP3Q5VZ66 844 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 PLIN2Q99541 437 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 HSD3B7Q9H2F3 369 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 BLZF1Q9H2G9 400 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 TMEM60Q9H2L4 133 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 FANCLQ9NW38 375 aa9.44□□□□□ -0.9
HDAC9-212ENST00000432645 TNS1Q9HBL0 1735 aaKnown RBP9.43□□□□□ -0.9
HDAC9-212ENST00000432645 RAD17O75943 681 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 TPM3P06753 285 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 TPM4P67936 248 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 MYL5Q02045 173 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 CCDC96Q2M329 555 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 SH3BP5LQ7L8J4 393 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 KIAA1524Q8TCG1 905 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 PAGE5Q96GU1 130 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-212ENST00000432645 TMEM260Q9NX78 707 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 SLFN14P0C7P3 912 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 CCDC172P0C7W6 258 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 NOVP48745 357 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 FMR1Q06787 632 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC9-212ENST00000432645 KLHL10Q6JEL2 608 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 SMYD4Q8IYR2 804 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-212ENST00000432645 C4orf32Q8N8J7 132 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 ZMYND12Q9H0C1 365 aa9.43□□□□□ -0.9
HDAC9-212ENST00000432645 IGKV6D-41A0A0C4DH26 115 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CCNT1O60563 726 aaKnown RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 GDF11O95390 407 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 SERPINC1P01008 464 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CDC25BP30305 580 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 SARSP49591 514 aaKnown RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 FANCCQ00597 558 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 SF3B2Q13435 895 aaKnown RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 RASSF8Q8NHQ8 419 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 C6orf50Q9HD87 102 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 ZNF277Q9NRM2 450 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 IKBKBO14920 756 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CAPN2P17655 700 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 KARSQ15046 597 aaKnown RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CFAP100Q494V2 611 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CERKLQ49MI3 558 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 ADGRF4Q8IZF3 695 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 DPF2Q92785 391 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 RIOX1Q9H6W3 641 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CLRN2A0PK11 232 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 COBLO75128 1261 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 GNA11P29992 359 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 MORC3Q14149 939 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 NT5DC1Q5TFE4 455 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 TMC6Q7Z403 805 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 TTLL6Q8N841 843 aa9.42□□□□□ -0.9
HDAC9-212ENST00000432645 CCDC12Q8WUD4 166 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-212ENST00000432645 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 EEF2P13639 858 aaKnown RBP9.41□□□□□ -0.9
HDAC9-212ENST00000432645 DPEP1P16444 411 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 SSR1P43307 286 aaKnown RBP9.41□□□□□ -0.9
HDAC9-212ENST00000432645 STX17P56962 302 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 CBX1P83916 185 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 ZNF543Q08ER8 600 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 SEPT2Q15019 361 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
HDAC9-212ENST00000432645 ASPRV1Q53RT3 343 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 GALNT17Q6IS24 598 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 ELOA2Q8IYF1 753 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-212ENST00000432645 REXO1Q8N1G1 1221 aaKnown RBP9.41□□□□□ -0.9
HDAC9-212ENST00000432645 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 DAGLBQ8NCG7 672 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 TBCKQ8TEA7 893 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 JMJD4Q9H9V9 463 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 SERPINA10Q9UK55 444 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 PLIN4Q96Q06 1357 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 UBASH3AP57075 661 aa9.41□□□□□ -0.9
HDAC9-212ENST00000432645 ZKSCAN8Q15776 578 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms