RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PDE4BQ07343 736 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 TSHZ3Q63HK5 1081 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 SLFN13Q68D06 897 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
PRKDC-203ENST00000432581 NEDD1Q8NHV4 660 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 MYLIPQ8WY64 445 aa17.72■□□□□ 0.43
PRKDC-203ENST00000432581 UPF3AQ9H1J1 476 aaKnown RBP17.72■□□□□ 0.43
PRKDC-203ENST00000432581 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.71■□□□□ 0.43
PRKDC-203ENST00000432581 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.71■□□□□ 0.43
PRKDC-203ENST00000432581 MYADML2A6NDP7 307 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 ERC2O15083 957 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 FOSL2P15408 326 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 GJA9P57773 515 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 CCDC144BQ3MJ40 725 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 CCDC174Q6PII3 467 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 ARMCX2Q7L311 632 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 FGD4Q96M96 766 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 TBX21Q9UL17 535 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.43
PRKDC-203ENST00000432581 TTC41PQ6P2S7 1318 aa17.71■□□□□ 0.42
PRKDC-203ENST00000432581 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
PRKDC-203ENST00000432581 ASGR1P07306 291 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 CDK7P50613 346 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 STAT2P52630 851 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 MFSD5Q6N075 450 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 NAPBQ9H115 298 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 ACAD9Q9H845 621 aa17.7■□□□□ 0.42
PRKDC-203ENST00000432581 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
PRKDC-203ENST00000432581 PPIGQ13427 754 aaKnown RBP eCLIP17.69■□□□□ 0.42
PRKDC-203ENST00000432581 GNASQ5JWF2 1037 aa17.69■□□□□ 0.42
PRKDC-203ENST00000432581 CCDC144CPQ8IYA2 1237 aa17.69■□□□□ 0.42
PRKDC-203ENST00000432581 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
PRKDC-203ENST00000432581 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
PRKDC-203ENST00000432581 ISY1Q9ULR0 285 aaKnown RBP17.69■□□□□ 0.42
PRKDC-203ENST00000432581 CDH23Q9H251 3354 aa17.69■□□□□ 0.42
PRKDC-203ENST00000432581 ARVCFO00192 962 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 TLR3O15455 904 aaKnown RBP17.68■□□□□ 0.42
PRKDC-203ENST00000432581 ADCY6O43306 1168 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 DNAJB2P25686 324 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 SLC1A4P43007 532 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 NKX3-2P78367 333 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 TFAP4Q01664 338 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 PPARAQ07869 468 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 IKQ13123 557 aaPredicted RBP17.68■□□□□ 0.42
PRKDC-203ENST00000432581 TKFCQ3LXA3 575 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 FAM133AQ8N9E0 248 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 KATNBL1Q9H079 304 aa17.68■□□□□ 0.42
PRKDC-203ENST00000432581 ASB14A6NK59 587 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 PLA2G6O60733 806 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 CNTN2Q02246 1040 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 ZMYM1Q5SVZ6 1142 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 TMEM199Q8N511 208 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.67■□□□□ 0.42
PRKDC-203ENST00000432581 FSD1Q9BTV5 496 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
PRKDC-203ENST00000432581 VCANP13611 3396 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 IRX5P78411 483 aaPredicted RBP17.66■□□□□ 0.42
PRKDC-203ENST00000432581 TNFAIP2Q03169 654 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 CCDC129Q6ZRS4 1044 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 FAM126BQ8IXS8 530 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 PI4K2BQ8TCG2 481 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 SEC62Q99442 399 aaKnown RBP17.66■□□□□ 0.42
PRKDC-203ENST00000432581 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
PRKDC-203ENST00000432581 ZNF536O15090 1300 aa17.66■□□□□ 0.42
PRKDC-203ENST00000432581 CTAGE5O15320 804 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 CABYRO75952 493 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 MCCP23508 829 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 TMEM240Q5SV17 173 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 PSRC1Q6PGN9 363 aaPredicted RBP17.65■□□□□ 0.42
PRKDC-203ENST00000432581 NOL8Q76FK4 1167 aaKnown RBP17.65■□□□□ 0.42
PRKDC-203ENST00000432581 AGBL1Q96MI9 1066 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 TRERF1Q96PN7 1200 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 SEZ6LQ9BYH1 1024 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 ZNF576Q9H609 170 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
PRKDC-203ENST00000432581 TSPY2A6NKD2 308 aa17.64■□□□□ 0.41
PRKDC-203ENST00000432581 CSF2RAP15509 400 aa17.64■□□□□ 0.41
PRKDC-203ENST00000432581 GRIN2CQ14957 1233 aa17.64■□□□□ 0.41
PRKDC-203ENST00000432581 RCSD1Q6JBY9 416 aa17.64■□□□□ 0.41
PRKDC-203ENST00000432581 SYMPKQ92797 1274 aaKnown RBP17.64■□□□□ 0.41
PRKDC-203ENST00000432581 AP5M1Q9H0R1 490 aa17.64■□□□□ 0.41
PRKDC-203ENST00000432581 GNEQ9Y223 722 aaKnown RBP17.64■□□□□ 0.41
PRKDC-203ENST00000432581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRKDC-203ENST00000432581 TTC28Q96AY4 2481 aa17.64■□□□□ 0.41
PRKDC-203ENST00000432581 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
PRKDC-203ENST00000432581 SOWAHBA6NEL2 793 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 ZEB2O60315 1214 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 CD4P01730 458 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 ALAS1P13196 640 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 BEX3Q00994 111 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 RASIP1Q5U651 963 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 KCTD1Q719H9 257 aa17.63■□□□□ 0.41
PRKDC-203ENST00000432581 C16orf59Q7L2K0 433 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms