RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 PLIN4Q96Q06 1357 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 CTIFO43310 598 aaKnown RBP16.59■□□□□ 0.25
RFTN1-203ENST00000432519 RRP9O43818 475 aaKnown RBP16.59■□□□□ 0.25
RFTN1-203ENST00000432519 GTPBP6O43824 516 aaPredicted RBP16.59■□□□□ 0.25
RFTN1-203ENST00000432519 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 TEKT1Q969V4 418 aa16.59■□□□□ 0.25
RFTN1-203ENST00000432519 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
RFTN1-203ENST00000432519 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.25
RFTN1-203ENST00000432519 MPHOSPH10O00566 681 aaKnown RBP16.58■□□□□ 0.25
RFTN1-203ENST00000432519 RPN1P04843 607 aaKnown RBP16.58■□□□□ 0.25
RFTN1-203ENST00000432519 SNHG28P0DPA3 235 aa16.58■□□□□ 0.25
RFTN1-203ENST00000432519 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.25
RFTN1-203ENST00000432519 GALNT17Q6IS24 598 aa16.58■□□□□ 0.25
RFTN1-203ENST00000432519 KCTD1Q719H9 257 aa16.58■□□□□ 0.25
RFTN1-203ENST00000432519 POTEDQ86YR6 584 aa16.58■□□□□ 0.25
RFTN1-203ENST00000432519 SUGT1Q9Y2Z0 365 aa16.58■□□□□ 0.25
RFTN1-203ENST00000432519 NONOQ15233 471 aaKnown RBP eCLIP16.58■□□□□ 0.24
RFTN1-203ENST00000432519 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.24
RFTN1-203ENST00000432519 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 MYO1BO43795 1136 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 PRCPP42785 496 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 PMS1P54277 932 aaKnown RBP16.57■□□□□ 0.24
RFTN1-203ENST00000432519 HHIPL2Q6UWX4 724 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 RASSF8Q8NHQ8 419 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 JMJD4Q9H9V9 463 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 C6orf50Q9HD87 102 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
RFTN1-203ENST00000432519 CCT6AP40227 531 aaKnown RBP16.57■□□□□ 0.24
RFTN1-203ENST00000432519 UBA7P41226 1012 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 TECP42680 631 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
RFTN1-203ENST00000432519 EEF2KMTQ96G04 330 aa16.57■□□□□ 0.24
RFTN1-203ENST00000432519 PDGFDQ9GZP0 370 aaPredicted RBP16.57■□□□□ 0.24
RFTN1-203ENST00000432519 SLC37A4O43826 429 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 KLRC4O43908 158 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 TTLL1O95922 423 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 UBE2SQ16763 222 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 SYT10Q6XYQ8 523 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 NEK8Q86SG6 692 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 CCDC112Q8NEF3 446 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 GJA10Q969M2 543 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 MMTAG2Q9BU76 263 aaKnown RBP16.56■□□□□ 0.24
RFTN1-203ENST00000432519 FAM198AQ9UFP1 575 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 TDP2O95551 362 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 PLCG1P19174 1290 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 ZNF543Q08ER8 600 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 MTF1Q14872 753 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 UIMC1Q96RL1 719 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
RFTN1-203ENST00000432519 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
RFTN1-203ENST00000432519 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
RFTN1-203ENST00000432519 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
RFTN1-203ENST00000432519 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 ECE2O60344 883 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 OR52Z1P0C646 297 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 GNA11P29992 359 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 RBM5P52756 815 aaKnown RBP eCLIP16.55■□□□□ 0.24
RFTN1-203ENST00000432519 NCBP1Q09161 790 aaKnown RBP16.55■□□□□ 0.24
RFTN1-203ENST00000432519 AOC3Q16853 763 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 REXO1L1PQ8IX06 675 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 RAD21O60216 631 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 TXLNAP40222 546 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 PBX1P40424 430 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 KMT5BQ4FZB7 885 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 ZNF658Q5TYW1 1059 aaPredicted RBP16.55■□□□□ 0.24
RFTN1-203ENST00000432519 TOGARAM2Q6ZUX3 1019 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 NELFBQ8WX92 580 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 CCSER1Q9C0I3 900 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 KBTBD4Q9NVX7 518 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
RFTN1-203ENST00000432519 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
RFTN1-203ENST00000432519 SMARCA1P28370 1054 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 TXKP42681 527 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
RFTN1-203ENST00000432519 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 LRRN4CLQ8ND94 238 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 ZDHHC15Q96MV8 337 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 BAG1Q99933 345 aaPredicted RBP16.54■□□□□ 0.24
RFTN1-203ENST00000432519 JAG1P78504 1218 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 RBL2Q08999 1139 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 KRT31Q15323 416 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 CABP7Q86V35 215 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 IRF2BP1Q8IU81 584 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 CCDC12Q8WUD4 166 aaPredicted RBP16.54■□□□□ 0.24
RFTN1-203ENST00000432519 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
RFTN1-203ENST00000432519 ZNF215Q9UL58 517 aaPredicted RBP16.54■□□□□ 0.24
RFTN1-203ENST00000432519 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms