RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 TTLL1O95922 423 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 ZFYP08048 801 aaPredicted RBP16.93■□□□□ 0.3
SEC13-212ENST00000432213 COPB2P35606 906 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 TFAP4Q01664 338 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 ZNF444Q8N0Y2 327 aaPredicted RBP16.93■□□□□ 0.3
SEC13-212ENST00000432213 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 TBX21Q9UL17 535 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
SEC13-212ENST00000432213 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 TMEM232C9JQI7 657 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 ZBED4O75132 1171 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 BMP3P12645 472 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 GNAT2P19087 354 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 BEX3Q00994 111 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 KCTD1Q719H9 257 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 C16orf59Q7L2K0 433 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEC13-212ENST00000432213 FAM133AQ8N9E0 248 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 UPF3AQ9H1J1 476 aaKnown RBP16.92■□□□□ 0.3
SEC13-212ENST00000432213 A1CFQ9NQ94 594 aaKnown RBP16.92■□□□□ 0.3
SEC13-212ENST00000432213 STARD7Q9NQZ5 370 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 FEM1BQ9UK73 627 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 FAM184BQ9ULE4 1060 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
SEC13-212ENST00000432213 DUSP11O75319 330 aaKnown RBP16.91■□□□□ 0.3
SEC13-212ENST00000432213 ASGR1P07306 291 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 MX1P20591 662 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 MCCP23508 829 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 ZNF467Q7Z7K2 595 aaPredicted RBP16.91■□□□□ 0.3
SEC13-212ENST00000432213 ANKRD35Q8N283 1001 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 MSL3Q8N5Y2 521 aaKnown RBP16.91■□□□□ 0.3
SEC13-212ENST00000432213 RNPC3Q96LT9 517 aaKnown RBP16.91■□□□□ 0.3
SEC13-212ENST00000432213 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
SEC13-212ENST00000432213 NAPBQ9H115 298 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 TMEM39AQ9NV64 488 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 CHD9Q3L8U1 2897 aa16.91■□□□□ 0.3
SEC13-212ENST00000432213 C6orf222P0C671 652 aaPredicted RBP16.9■□□□□ 0.3
SEC13-212ENST00000432213 RAG1P15918 1043 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 CST5P28325 142 aaPredicted RBP16.9■□□□□ 0.3
SEC13-212ENST00000432213 CDK7P50613 346 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
SEC13-212ENST00000432213 CCDC174Q6PII3 467 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 PDGFCQ9NRA1 345 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 RNF146Q9NTX7 359 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 MTMR7Q9Y216 660 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 UMODL1Q5DID0 1318 aa16.9■□□□□ 0.3
SEC13-212ENST00000432213 GRXCR1A8MXD5 290 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 GJA9P57773 515 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 FPGSQ05932 587 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 TTBK2Q6IQ55 1244 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 USP38Q8NB14 1042 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 CHST13Q8NET6 341 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.297e-14■■■□□ 15.6
SEC13-212ENST00000432213 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
SEC13-212ENST00000432213 GRIN2DO15399 1336 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 VCANP13611 3396 aa16.89■□□□□ 0.29
SEC13-212ENST00000432213 SPTBN5Q9NRC6 3674 aaKnown RBP16.89■□□□□ 0.29
SEC13-212ENST00000432213 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 PBX2P40425 430 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 OAZ1P54368 228 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 FAM126BQ8IXS8 530 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
SEC13-212ENST00000432213 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 GMCL1Q96IK5 515 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 CRBNQ96SW2 442 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 ABHD16BQ9H3Z7 469 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 PRR12Q9ULL5 1215 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
SEC13-212ENST00000432213 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
SEC13-212ENST00000432213 TIMP1P01033 207 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 ACRP10323 421 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 ALAS1P13196 640 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 CSF2RAP15509 400 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 SMPD1P17405 629 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 SLC16A2P36021 539 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 SLC1A4P43007 532 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 NOVP48745 357 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 STAT2P52630 851 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 PDE4BQ07343 736 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 GRIN2CQ14957 1233 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 EEPD1Q7L9B9 569 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 FBXO16Q8IX29 292 aaPredicted RBP16.87■□□□□ 0.29
SEC13-212ENST00000432213 PPP1R12CQ9BZL4 782 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 STX8Q9UNK0 236 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 PTPRSQ13332 1948 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 REV3LO60673 3130 aa16.87■□□□□ 0.29
SEC13-212ENST00000432213 GNASQ5JWF2 1037 aa16.86■□□□□ 0.29
SEC13-212ENST00000432213 TMEM240Q5SV17 173 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms