RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 RRP36Q96EU6 259 aaKnown RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 GSDMAQ96QA5 445 aa14.57□□□□□ -0.08
DDX56-204ENST00000431640 ZNF70Q9UC06 446 aaPredicted RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 ZC3H4Q9UPT8 1303 aaKnown RBP14.57□□□□□ -0.08
DDX56-204ENST00000431640 VWA3AA6NCI4 1184 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 M0R2N6 131 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 SERPINC1P01008 464 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 LMOD1P29536 600 aaPredicted RBP14.56□□□□□ -0.08
DDX56-204ENST00000431640 TXLNAP40222 546 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 UBASH3AP57075 661 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 GABPAQ06546 454 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 KIF4BQ2VIQ3 1234 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 RBM26Q5T8P6 1007 aaKnown RBP14.56□□□□□ -0.08
DDX56-204ENST00000431640 FILIP1Q7Z7B0 1213 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 OGFOD1Q8N543 542 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 CEP95Q96GE4 821 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 EPSTI1Q96J88 318 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
DDX56-204ENST00000431640 ZMYND12Q9H0C1 365 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 C6orf50Q9HD87 102 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 SEC63Q9UGP8 760 aaKnown RBP14.56□□□□□ -0.08
DDX56-204ENST00000431640 HDAC9Q9UKV0 1011 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 PLIN4Q96Q06 1357 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 STXBP3O00186 592 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 FOXN1O15353 648 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 CYTH3O43739 400 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 HLA-DOAP06340 250 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 VEGFAP15692 232 aaPredicted RBP14.56□□□□□ -0.08
DDX56-204ENST00000431640 MCM7P33993 719 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 LRMPQ12912 555 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 WWC2Q6AWC2 1192 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 USP49Q70CQ1 688 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 KRT25Q7Z3Z0 450 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 HEATR3Q7Z4Q2 680 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 GPKOWQ92917 476 aaPredicted RBP eCLIP14.56□□□□□ -0.085e-7■■■■■ 43.5
DDX56-204ENST00000431640 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
DDX56-204ENST00000431640 SCN4AP35499 1836 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 GLTPD2A6NH11 291 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 SKILP12757 684 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 TCP10Q12799 353 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 SEMA3FQ13275 785 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 ORC2Q13416 577 aaPredicted RBP14.55□□□□□ -0.08
DDX56-204ENST00000431640 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 DTHD1Q6ZMT9 781 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 C17orf53Q8N3J3 647 aaPredicted RBP14.55□□□□□ -0.08
DDX56-204ENST00000431640 C4orf32Q8N8J7 132 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 HSD3B7Q9H2F3 369 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 KCND1Q9NSA2 647 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 SERPINB13Q9UIV8 391 aa14.55□□□□□ -0.08
DDX56-204ENST00000431640 COL2A1P02458 1487 aaPredicted RBP14.54□□□□□ -0.08
DDX56-204ENST00000431640 DDTLA6NHG4 134 aaPredicted RBP14.54□□□□□ -0.08
DDX56-204ENST00000431640 TCP10L2B9ZVM9 353 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 PRR29P0C7W0 189 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 BMP6P22004 513 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 PRPHP41219 470 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 NAPAP54920 295 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 NOM1Q5C9Z4 860 aaKnown RBP14.54□□□□□ -0.08
DDX56-204ENST00000431640 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 CCDC17Q96LX7 622 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 RIOX1Q9H6W3 641 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 FANCLQ9NW38 375 aa14.54□□□□□ -0.08
DDX56-204ENST00000431640 ATRNL1Q5VV63 1379 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 IGKV6D-41A0A0C4DH26 115 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 ESYT2A0FGR8 921 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 WNT7AO00755 349 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 DYNC1I1O14576 645 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 TTLL1O95922 423 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 CDK11BP21127 795 aaKnown RBP14.53□□□□□ -0.08
DDX56-204ENST00000431640 DPYDQ12882 1025 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 MYRIPQ8NFW9 859 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 EHD4Q9H223 541 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 DHX36Q9H2U1 1008 aaKnown RBP14.53□□□□□ -0.08
DDX56-204ENST00000431640 DNAJC18Q9H819 358 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
DDX56-204ENST00000431640 PGAP2Q9UHJ9 254 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
DDX56-204ENST00000431640 A0A087X0B3 334 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 UQCRHLA0A096LP55 91 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 SMCO2A6NFE2 343 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 GTPBP6O43824 516 aaPredicted RBP14.52□□□□□ -0.08
DDX56-204ENST00000431640 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.08
DDX56-204ENST00000431640 MYL1P05976 194 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 UQCRHP07919 91 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 GOLGA8HP0CJ92 632 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 SFPQP23246 707 aaKnown RBP eCLIP14.52□□□□□ -0.08
DDX56-204ENST00000431640 AFMP43652 599 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 KCNJ6P48051 423 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 E2F4Q16254 413 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 TPD52L1Q16890 204 aaPredicted RBP14.52□□□□□ -0.08
DDX56-204ENST00000431640 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 USP17L2Q6R6M4 530 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 VEZTQ9HBM0 779 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 RMND1Q9NWS8 449 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 HACL1Q9UJ83 578 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 SSC5DA1L4H1 1573 aa14.52□□□□□ -0.08
DDX56-204ENST00000431640 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms