RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
CSNK1E-209ENST00000431632 APBA2Q99767 749 aa16.71■□□□□ 0.27
CSNK1E-209ENST00000431632 HOMER2Q9NSB8 354 aa16.71■□□□□ 0.27
CSNK1E-209ENST00000431632 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.27
CSNK1E-209ENST00000431632 MAD2L2Q9UI95 211 aa16.71■□□□□ 0.27
CSNK1E-209ENST00000431632 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
CSNK1E-209ENST00000431632 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 SH2B2O14492 632 aaPredicted RBP16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 HMGCRP04035 888 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 ICAM1P05362 532 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 ALAS1P13196 640 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 CCL5P13501 91 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 TROAPQ12815 778 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 KCTD2Q14681 263 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 CHST13Q8NET6 341 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 TRERF1Q96PN7 1200 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
CSNK1E-209ENST00000431632 POTEFA5A3E0 1075 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 KLRF2D3W0D1 207 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 CPA1P15085 419 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 TAL1P17542 331 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 GRM4Q14833 912 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 NFXL1Q6ZNB6 911 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 TCEANC2Q96MN5 208 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 TMEM106CQ9BVX2 250 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 CCPG1Q9ULG6 757 aa16.69■□□□□ 0.26
CSNK1E-209ENST00000431632 LIFRP42702 1097 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 CACNB2Q08289 660 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 TKFCQ3LXA3 575 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 ANKRD35Q8N283 1001 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 DDX11Q96FC9 970 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 MYL10Q9BUA6 226 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 JMJD4Q9H9V9 463 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 RNF146Q9NTX7 359 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
CSNK1E-209ENST00000431632 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 IGHA2P01877 340 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 HMGB1P09429 215 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 ZNF792Q3KQV3 632 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 MUM1L1Q5H9M0 696 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 MAP3K21Q5TCX8 1036 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 ZNF654Q8IZM8 581 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 MAML3Q96JK9 1138 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 ACAD9Q9H845 621 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
CSNK1E-209ENST00000431632 KIAA0100Q14667 2235 aaKnown RBP16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 DNAJC25-GNG10A0A024R161 153 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 CYP2C19P33261 490 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 RGS19P49795 217 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 MFSD14CQ5VZR4 134 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 OLFML2BQ68BL8 750 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 MAP3K14Q99558 947 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 HMX1Q9NP08 348 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
CSNK1E-209ENST00000431632 SEC24BO95487 1268 aa16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 GJB1P08034 283 aa16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 DIS3Q9Y2L1 958 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
CSNK1E-209ENST00000431632 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.26
CSNK1E-209ENST00000431632 DDAH1O94760 285 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 RXRAP19793 462 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 PSMA5P28066 241 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 CCND3P30281 292 aaPredicted RBP16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 PRAMEF19Q5SWL8 479 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 RAB11FIP4Q86YS3 637 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 CCDC144CPQ8IYA2 1237 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 TRPV1Q8NER1 839 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 DEFB118Q96PH6 123 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.254e-8■■□□□ 12.3
CSNK1E-209ENST00000431632 RIOX1Q9H6W3 641 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 CYP39A1Q9NYL5 469 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 PNMA2Q9UL42 364 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
CSNK1E-209ENST00000431632 SMCHD1A6NHR9 2005 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms