RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 SLC15A5A6NIM6 579 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 ICAM1P05362 532 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 SNAP25P60880 206 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 GRB14Q14449 540 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 TKFCQ3LXA3 575 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 WDR78Q5VTH9 848 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 CCDC174Q6PII3 467 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 USP6NLQ92738 828 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 NUDT12Q9BQG2 462 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 CPVLQ9H3G5 476 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 BRPF3Q9ULD4 1205 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 RIPK3Q9Y572 518 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 PTCH2Q9Y6C5 1203 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 IVNS1ABPQ9Y6Y0 642 aa23.38■■□□□ 1.33
CSNK1E-207ENST00000430335 SMARCA1P28370 1054 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 GNAQP50148 359 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 CHST13Q8NET6 341 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 RAET1EQ8TD07 263 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 BRF1Q92994 677 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 AGBL1Q96MI9 1066 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 LZTS2Q9BRK4 669 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 UPF3BQ9BZI7 483 aaKnown RBP23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 RIOX1Q9H6W3 641 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 JMJD4Q9H9V9 463 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 FBXO40Q9UH90 709 aa23.37■■□□□ 1.33
CSNK1E-207ENST00000430335 KLF18A0A0U1RQI7 1052 aa23.36■■□□□ 1.33
CSNK1E-207ENST00000430335 ZBTB43O43298 467 aa23.36■■□□□ 1.33
CSNK1E-207ENST00000430335 MICU3Q86XE3 530 aa23.36■■□□□ 1.33
CSNK1E-207ENST00000430335 FANCBQ8NB91 859 aa23.36■■□□□ 1.33
CSNK1E-207ENST00000430335 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
CSNK1E-207ENST00000430335 DOCK3Q8IZD9 2030 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 FCER1AP12319 257 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 XRCC5P13010 732 aaKnown RBP23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 RXRAP19793 462 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 RGS2P41220 211 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 EVCP57679 992 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 MAP2K5Q13163 448 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 CDC37Q16543 378 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 SLC35G1Q2M3R5 365 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 TNS4Q8IZW8 715 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 SPZ1Q9BXG8 430 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 ALDH8A1Q9H2A2 487 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 PDRG1Q9NUG6 133 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
CSNK1E-207ENST00000430335 CYTH3O43739 400 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 DHX16O60231 1041 aaKnown RBP23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 HOXC6P09630 235 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 RBM25P49756 843 aaKnown RBP23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 APOBRQ0VD83 1088 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 TOB2Q14106 344 aaPredicted RBP23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 PPP2R5BQ15173 497 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 PXYLP1Q8TE99 480 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 MMP19Q99542 508 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 C22orf23Q9BZE7 217 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 UPF2Q9HAU5 1272 aaKnown RBP23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 VAT1LQ9HCJ6 419 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 RBM28Q9NW13 759 aaKnown RBP23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 HPS5Q9UPZ3 1129 aa23.34■■□□□ 1.33
CSNK1E-207ENST00000430335 ALAS1P13196 640 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 ADORA2AP29274 412 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 SLC4A3P48751 1232 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 KCTD2Q14681 263 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 NBPF11Q86T75 865 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 RAB11FIP4Q86YS3 637 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 SLAIN1Q8ND83 568 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 TRERF1Q96PN7 1200 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 ACAD9Q9H845 621 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 RNF146Q9NTX7 359 aa23.33■■□□□ 1.33
CSNK1E-207ENST00000430335 NID2Q14112 1375 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 ZBTB5O15062 677 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 ADCY3O60266 1144 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 RTN1Q16799 776 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 QRICH1Q2TAL8 776 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 TMTC3Q6ZXV5 915 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 APBA2Q99767 749 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 BACH2Q9BYV9 841 aa23.32■■□□□ 1.32
CSNK1E-207ENST00000430335 PLXNB2O15031 1838 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 ZNF236Q9UL36 1845 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 GOLGA8AA7E2F4 631 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 GOLGA8BA8MQT2 603 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 PLEKHA8P1O95397 391 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 CYP2B6P20813 491 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 GRK4P32298 578 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 TRMT44Q8IYL2 757 aaKnown RBP23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 SRBD1Q8N5C6 995 aaKnown RBP23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 HOMER2Q9NSB8 354 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 SLC5A4Q9NY91 659 aa23.31■■□□□ 1.32
CSNK1E-207ENST00000430335 METAP2P50579 478 aaKnown RBP eCLIP23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 SLC9C1Q4G0N8 1177 aa23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 DPP9Q86TI2 863 aa23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 FBXO11Q86XK2 927 aa23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 ARMC5Q96C12 935 aa23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 FAM217BQ9NTX9 383 aaPredicted RBP23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 HTTP42858 3142 aa23.3■■□□□ 1.32
CSNK1E-207ENST00000430335 PNMA6FA0A0J9YX94 578 aa23.29■■□□□ 1.32
CSNK1E-207ENST00000430335 CCDC196A0A1B0GTZ2 297 aa23.29■■□□□ 1.32
CSNK1E-207ENST00000430335 COBLO75128 1261 aa23.29■■□□□ 1.32
CSNK1E-207ENST00000430335 PDIA3P30101 505 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms