RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 MUM1L1Q5H9M0 696 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 TTBK2Q6IQ55 1244 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 OSBPL3Q9H4L5 887 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 ZNF287Q9HBT7 754 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 A1CFQ9NQ94 594 aaKnown RBP13.97□□□□□ -0.17
HDAC4-202ENST00000430200 PDLIM7Q9NR12 457 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 PRR12Q9ULL5 1215 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 ATP11BQ9Y2G3 1177 aa13.97□□□□□ -0.17
HDAC4-202ENST00000430200 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 SYNGAP1Q96PV0 1343 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 TANC1Q9C0D5 1861 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 SDSP20132 328 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 ITGB8P26012 769 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 COPB2P35606 906 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 SLC1A4P43007 532 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 STAT2P52630 851 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-202ENST00000430200 RRP12Q5JTH9 1297 aaKnown RBP13.96□□□□□ -0.17
HDAC4-202ENST00000430200 SLC39A5Q6ZMH5 540 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 TDHQ8IZJ6 230 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 FAM133AQ8N9E0 248 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 RILPL2Q969X0 211 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
HDAC4-202ENST00000430200 RNF146Q9NTX7 359 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 SLC5A4Q9NY91 659 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 ISY1Q9ULR0 285 aaKnown RBP13.96□□□□□ -0.17
HDAC4-202ENST00000430200 PHF24Q9UPV7 400 aa13.96□□□□□ -0.17
HDAC4-202ENST00000430200 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 A0A1W2PQ45 241 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 A0A1W2PQY0 241 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 KBTBD13C9JR72 458 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 CTAGE5O15320 804 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 ZBED4O75132 1171 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 SLC3A2P08195 630 aaKnown RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 GSPT1P15170 499 aaKnown RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 SLC16A2P36021 539 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 OAZ1P54368 228 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 TMEM63BQ5T3F8 832 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 Q7L0L9 218 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 ARMCX2Q7L311 632 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 STAG1Q8WVM7 1258 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 UBE2OQ9C0C9 1292 aaKnown RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 NRBP1Q9UHY1 535 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-202ENST00000430200 SCN5AQ14524 2016 aa13.95□□□□□ -0.18
HDAC4-202ENST00000430200 VCANP13611 3396 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 TRIM43BA6NCK2 446 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 RARBP10826 455 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 AKR1A1P14550 325 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 CCSAPQ6IQ19 270 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 CCDC144CPQ8IYA2 1237 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 ARRDC4Q8NCT1 418 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 TRIM43Q96BQ3 446 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 DDX11Q96FC9 970 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 ZKSCAN3Q9BRR0 538 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
HDAC4-202ENST00000430200 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 SUPT16HQ9Y5B9 1047 aaKnown RBP13.94□□□□□ -0.18
HDAC4-202ENST00000430200 DOCK5Q9H7D0 1870 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 PLA2G6O60733 806 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 PDHBP11177 359 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 ALAS1P13196 640 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-202ENST00000430200 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 C9orf50Q5SZB4 431 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
HDAC4-202ENST00000430200 FAM160B2Q86V87 743 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 ANKRD35Q8N283 1001 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 KLHDC9Q8NEP7 349 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 CHST13Q8NET6 341 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
HDAC4-202ENST00000430200 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
HDAC4-202ENST00000430200 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 BAZ2BQ9UIF8 2168 aaKnown RBP13.92□□□□□ -0.18
HDAC4-202ENST00000430200 PTPRSQ13332 1948 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 NFIBO00712 420 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 EPHB4P54760 987 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 TLE2Q04725 743 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 AAMPQ13685 434 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 LRIT3Q3SXY7 679 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 AKNAD1Q5T1N1 836 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 SLC30A10Q6XR72 485 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 DCAF4Q8WV16 495 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-202ENST00000430200 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
HDAC4-202ENST00000430200 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms