RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PRR12Q9ULL5 1215 aa19.96■□□□□ 0.79
UBE3D-204ENST00000430071 CTDP1Q9Y5B0 961 aaPredicted RBP19.96■□□□□ 0.79
UBE3D-204ENST00000430071 ATN1P54259 1190 aaPredicted RBP19.95■□□□□ 0.79
UBE3D-204ENST00000430071 IKQ13123 557 aaPredicted RBP19.95■□□□□ 0.79
UBE3D-204ENST00000430071 CCDC174Q6PII3 467 aa19.95■□□□□ 0.79
UBE3D-204ENST00000430071 MFSD6Q6ZSS7 791 aa19.95■□□□□ 0.79
UBE3D-204ENST00000430071 CHURC1Q8WUH1 139 aa19.95■□□□□ 0.79
UBE3D-204ENST00000430071 DDX11Q96FC9 970 aa19.95■□□□□ 0.79
UBE3D-204ENST00000430071 TCP11L1Q9NUJ3 509 aa19.95■□□□□ 0.79
UBE3D-204ENST00000430071 DIS3Q9Y2L1 958 aaKnown RBP19.95■□□□□ 0.79
UBE3D-204ENST00000430071 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.79
UBE3D-204ENST00000430071 FRMPD2Q68DX3 1309 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-204ENST00000430071 LRRC37A2A6NM11 1700 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 MSCO60682 206 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 SNAI1O95863 264 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-204ENST00000430071 ZNF865P0CJ78 1059 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-204ENST00000430071 COPB2P35606 906 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 CNTN2Q02246 1040 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 PTH1RQ03431 593 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 CCDC96Q2M329 555 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 FAM160B2Q86V87 743 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 DSCC1Q9BVC3 393 aa19.95■□□□□ 0.78
UBE3D-204ENST00000430071 LAMA3Q16787 3333 aa19.94■□□□□ 0.78
UBE3D-204ENST00000430071 PLA2G6O60733 806 aa19.94■□□□□ 0.78
UBE3D-204ENST00000430071 MYCNP04198 464 aaPredicted RBP19.94■□□□□ 0.78
UBE3D-204ENST00000430071 IRX5P78411 483 aaPredicted RBP19.94■□□□□ 0.78
UBE3D-204ENST00000430071 MUM1L1Q5H9M0 696 aa19.94■□□□□ 0.78
UBE3D-204ENST00000430071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.94■□□□□ 0.78
UBE3D-204ENST00000430071 GPCPD1Q9NPB8 672 aa19.94■□□□□ 0.78
UBE3D-204ENST00000430071 LTBP2Q14767 1821 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 ZNF213O14771 459 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 TOP1P11387 765 aaKnown RBP19.93■□□□□ 0.78
UBE3D-204ENST00000430071 OAZ1P54368 228 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 LRRC41Q15345 812 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 CASC1Q6TDU7 716 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 ANKRD35Q8N283 1001 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 RNF146Q9NTX7 359 aa19.93■□□□□ 0.78
UBE3D-204ENST00000430071 B4E1Z4 1266 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 DNM1LO00429 736 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 ADCY6O43306 1168 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 PGK1P00558 417 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 ALAS1P13196 640 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 PPP4R3BQ5MIZ7 849 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 CHST13Q8NET6 341 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 DCAF4Q8WV16 495 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 FERMT2Q96AC1 680 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 PURBQ96QR8 312 aaKnown RBP19.92■□□□□ 0.78
UBE3D-204ENST00000430071 GDF15Q99988 308 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 LSG1Q9H089 658 aaKnown RBP19.92■□□□□ 0.78
UBE3D-204ENST00000430071 CPVLQ9H3G5 476 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 A1CFQ9NQ94 594 aaKnown RBP19.92■□□□□ 0.78
UBE3D-204ENST00000430071 ASTN1O14525 1302 aa19.92■□□□□ 0.78
UBE3D-204ENST00000430071 SOWAHBA6NEL2 793 aa19.91■□□□□ 0.78
UBE3D-204ENST00000430071 KDM4AO75164 1064 aa19.91■□□□□ 0.78
UBE3D-204ENST00000430071 PDHBP11177 359 aa19.91■□□□□ 0.78
UBE3D-204ENST00000430071 MAMDC4Q6UXC1 1216 aa19.91■□□□□ 0.78
UBE3D-204ENST00000430071 TRERF1Q96PN7 1200 aa19.91■□□□□ 0.78
UBE3D-204ENST00000430071 FDX1P10109 184 aa19.9■□□□□ 0.78
UBE3D-204ENST00000430071 ADCYAP1R1P41586 468 aa19.9■□□□□ 0.78
UBE3D-204ENST00000430071 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
UBE3D-204ENST00000430071 GOLGA8HP0CJ92 632 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 MAGEA10P43363 369 aaPredicted RBP19.89■□□□□ 0.77
UBE3D-204ENST00000430071 SYDE2Q5VT97 1194 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 FAM133AQ8N9E0 248 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 ARRDC4Q8NCT1 418 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 MAP4K1Q92918 833 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 RANBP17Q9H2T7 1088 aaKnown RBP19.89■□□□□ 0.77
UBE3D-204ENST00000430071 RNF41Q9H4P4 317 aaPredicted RBP19.89■□□□□ 0.77
UBE3D-204ENST00000430071 ACAD9Q9H845 621 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 ANO2Q9NQ90 1003 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 XPNPEP3Q9NQH7 507 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.89■□□□□ 0.77
UBE3D-204ENST00000430071 ZSWIM5Q9P217 1185 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 FBXO40Q9UH90 709 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 ZHX1Q9UKY1 873 aaPredicted RBP19.89■□□□□ 0.77
UBE3D-204ENST00000430071 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 SYNGAP1Q96PV0 1343 aa19.89■□□□□ 0.77
UBE3D-204ENST00000430071 LAMA2P24043 3122 aaKnown RBP19.88■□□□□ 0.77
UBE3D-204ENST00000430071 SNHG28P0DPA3 235 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 PCP11498 1178 aaKnown RBP19.88■□□□□ 0.77
UBE3D-204ENST00000430071 PTGS1P23219 599 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 RTP1P59025 263 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 ZNF543Q08ER8 600 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 SLC39A5Q6ZMH5 540 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 KIAA1211Q6ZU35 1233 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 ARMCX2Q7L311 632 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 CCDC144CPQ8IYA2 1237 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 ESR2Q92731 530 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 TTC14Q96N46 770 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 KATNBL1Q9H079 304 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 NRBP1Q9UHY1 535 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 CCPG1Q9ULG6 757 aa19.88■□□□□ 0.77
UBE3D-204ENST00000430071 MYADML2A6NDP7 307 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 KBTBD13C9JR72 458 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 POTEB2H3BUK9 544 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
UBE3D-204ENST00000430071 RARBP10826 455 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 AKR1A1P14550 325 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 CYB5R4Q7L1T6 521 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 ZNF467Q7Z7K2 595 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms