RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 STRIP1Q5VSL9 837 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 FERMT2Q96AC1 680 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 ZDHHC15Q96MV8 337 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
RPE-206ENST00000429921 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 SKILP12757 684 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 TXKP42681 527 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 TNNI2P48788 182 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 SARSP49591 514 aaKnown RBP11.49□□□□□ -0.57
RPE-206ENST00000429921 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
RPE-206ENST00000429921 DTHD1Q6ZMT9 781 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 ZNF592Q92610 1267 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 SPZ1Q9BXG8 430 aa11.49□□□□□ -0.57
RPE-206ENST00000429921 TDP2O95551 362 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 ZYXQ15942 572 aaKnown RBP11.48□□□□□ -0.57
RPE-206ENST00000429921 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.48□□□□□ -0.57
RPE-206ENST00000429921 VEZTQ9HBM0 779 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 MYH8P13535 1937 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 UQCRHLA0A096LP55 91 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 IGKV6D-41A0A0C4DH26 115 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L15C9J2P7 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L13C9JLJ4 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L11C9JVI0 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L18D6R9N7 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L22D6RA61 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L17D6RBQ6 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L19D6RCP7 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L20D6RJB6 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 PSMD14O00487 310 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 UQCRHP07919 91 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 TPM4P67936 248 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L24Q0WX57 530 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 IKQ13123 557 aaPredicted RBP11.48□□□□□ -0.57
RPE-206ENST00000429921 RBM26Q5T8P6 1007 aaKnown RBP11.48□□□□□ -0.57
RPE-206ENST00000429921 USP17L6PQ6QN14 398 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 SIAH1Q8IUQ4 282 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 CCDC148Q8NFR7 591 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 ARID3AQ99856 593 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 BPIFA3Q9BQP9 254 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 ZMYND12Q9H0C1 365 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 C6orf50Q9HD87 102 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 INTS13Q9NVM9 706 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 HOOK1Q9UJC3 728 aaKnown RBP11.48□□□□□ -0.57
RPE-206ENST00000429921 CTNND2Q9UQB3 1225 aa11.48□□□□□ -0.57
RPE-206ENST00000429921 SLC37A4O43826 429 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 STAT6P42226 847 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 ZNF543Q08ER8 600 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 E2F4Q16254 413 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 TPD52L1Q16890 204 aaPredicted RBP11.47□□□□□ -0.57
RPE-206ENST00000429921 USH1GQ495M9 461 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 PDXDC2PQ6P474 469 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 CERS3Q8IU89 383 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 RIOX1Q9H6W3 641 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 SH3GLB2Q9NR46 395 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 PITPNM1O00562 1244 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 EDIL3O43854 480 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 GH2P01242 217 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 CCZ1BP86790 482 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 CCZ1P86791 482 aaPredicted RBP11.47□□□□□ -0.57
RPE-206ENST00000429921 NONOQ15233 471 aaKnown RBP eCLIP11.47□□□□□ -0.57
RPE-206ENST00000429921 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
RPE-206ENST00000429921 SUGT1Q9Y2Z0 365 aa11.47□□□□□ -0.57
RPE-206ENST00000429921 KCNA3P22001 575 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 CDC25BP30305 580 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 UBA7P41226 1012 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 ECE1P42892 770 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.57
RPE-206ENST00000429921 TTLL6Q8N841 843 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 CPLX3Q8WVH0 158 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 CSRNP1Q96S65 589 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 FOCADQ5VW36 1801 aa11.46□□□□□ -0.57
RPE-206ENST00000429921 IKBKBO14920 756 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 TEX33O43247 280 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 SLC1A4P43007 532 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.58
RPE-206ENST00000429921 SF3B2Q13435 895 aaKnown RBP11.46□□□□□ -0.58
RPE-206ENST00000429921 NAALADL2Q58DX5 795 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 SLFN13Q68D06 897 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 LZTS2Q9BRK4 669 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.58
RPE-206ENST00000429921 COL4A5P29400 1685 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 POTEMA6NI47 508 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 ADCY7P51828 1080 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 NUDT12Q9BQG2 462 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms