RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RNF180Q86T96 592 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 ANKRD35Q8N283 1001 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 KLHDC9Q8NEP7 349 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 CHST13Q8NET6 341 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 STAG1Q8WVM7 1258 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 BADQ92934 168 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 LNPKQ9C0E8 428 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 KATNBL1Q9H079 304 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 HELLSQ9NRZ9 838 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 MTMR10Q9NXD2 777 aa18.41■□□□□ 0.54
SEC13-210ENST00000428626 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.41■□□□□ 0.54
SEC13-210ENST00000428626 CTDP1Q9Y5B0 961 aaPredicted RBP18.41■□□□□ 0.54
SEC13-210ENST00000428626 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
SEC13-210ENST00000428626 ORC4O43929 436 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 RANBP6O60518 1105 aaKnown RBP18.4■□□□□ 0.54
SEC13-210ENST00000428626 FGAP02671 866 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
SEC13-210ENST00000428626 ACVR2BQ13705 512 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 SHHQ15465 462 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
SEC13-210ENST00000428626 A1CFQ9NQ94 594 aaKnown RBP18.4■□□□□ 0.54
SEC13-210ENST00000428626 PRKAG2Q9UGJ0 569 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 FBXO40Q9UH90 709 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 FAM184BQ9ULE4 1060 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
SEC13-210ENST00000428626 ASTN1O14525 1302 aa18.4■□□□□ 0.54
SEC13-210ENST00000428626 LCTP09848 1927 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 SOWAHBA6NEL2 793 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 IGHDP01880 384 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 ARMCX2Q7L311 632 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 FAM160B2Q86V87 743 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.53
SEC13-210ENST00000428626 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 MTMR7Q9Y216 660 aa18.39■□□□□ 0.53
SEC13-210ENST00000428626 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 PLA2G6O60733 806 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
SEC13-210ENST00000428626 PTGS1P23219 599 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 ACLYP53396 1101 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 KCNA10Q16322 511 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 CCDC144BQ3MJ40 725 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 MCMDC2Q4G0Z9 681 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 CCDC174Q6PII3 467 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 CHURC1Q8WUH1 139 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 A0A0C4DFX4 3053 aa18.38■□□□□ 0.53
SEC13-210ENST00000428626 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
SEC13-210ENST00000428626 CTAGE5O15320 804 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 PQBP1O60828 265 aaKnown RBP18.37■□□□□ 0.53
SEC13-210ENST00000428626 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
SEC13-210ENST00000428626 FDX1P10109 184 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 EPHB4P54760 987 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 HAND2P61296 217 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
SEC13-210ENST00000428626 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 PURBQ96QR8 312 aaKnown RBP18.37■□□□□ 0.53
SEC13-210ENST00000428626 TSEN34Q9BSV6 310 aaKnown RBP18.37■□□□□ 0.53
SEC13-210ENST00000428626 ABHD16BQ9H3Z7 469 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
SEC13-210ENST00000428626 CLTBP09497 229 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 ALAS1P13196 640 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 CST5P28325 142 aaPredicted RBP18.36■□□□□ 0.53
SEC13-210ENST00000428626 SLC16A2P36021 539 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 FAAP100Q0VG06 881 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 RRP12Q5JTH9 1297 aaKnown RBP18.36■□□□□ 0.53
SEC13-210ENST00000428626 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 PLEKHM2Q8IWE5 1019 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 TMEM47Q9BQJ4 181 aa18.36■□□□□ 0.53
SEC13-210ENST00000428626 UPF3AQ9H1J1 476 aaKnown RBP18.36■□□□□ 0.53
SEC13-210ENST00000428626 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 KIAA0355O15063 1070 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 GJA9P57773 515 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 TMEM63BQ5T3F8 832 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 ANKRD33Q7Z3H0 272 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 EXOC6Q8TAG9 804 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 GUCD1Q96NT3 240 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 STARD7Q9NQZ5 370 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 TOMM22Q9NS69 142 aa18.35■□□□□ 0.53
SEC13-210ENST00000428626 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 MOXD2PA6NHM9 499 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 TRIM6-TRIM34B2RNG4 842 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 C6orf222P0C671 652 aaPredicted RBP18.34■□□□□ 0.53
SEC13-210ENST00000428626 CCDC96Q2M329 555 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 TKFCQ3LXA3 575 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 PPP4R3BQ5MIZ7 849 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 SLC17A8Q8NDX2 589 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 RILPL2Q969X0 211 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 CYP39A1Q9NYL5 469 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 CDH23Q9H251 3354 aa18.34■□□□□ 0.53
SEC13-210ENST00000428626 FRMPD2Q68DX3 1309 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms