RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 POLR2MP0CAP2 368 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 ALAS1P13196 640 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 BCAMP50895 628 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CHRNDQ07001 517 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 TFDP1Q14186 410 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 LRRC24Q50LG9 513 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 GOLGA5Q8TBA6 731 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 LLPHQ9BRT6 129 aaKnown RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 GREM2Q9H772 168 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 ARPP21Q9UBL0 812 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 RABGAP1Q9Y3P9 1069 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 TLR3O15455 904 aaKnown RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 ARHGAP44Q17R89 818 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 ANKRD20A3Q5VUR7 823 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 PEX26Q7Z412 305 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CTAGE3PQ8IX95 158 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 REXO1Q8N1G1 1221 aaKnown RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 GRK7Q8WTQ7 553 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 AP5M1Q9H0R1 490 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 RIC8AQ9NPQ8 531 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CCPG1Q9ULG6 757 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 SPATA31A3Q5VYP0 1347 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 PRAMEF22A3QJZ6 481 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 TTC31Q49AM3 519 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 SEPT12Q8IYM1 358 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 SSH3Q8TE77 659 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CNKSR1Q969H4 720 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 NCOA5Q9HCD5 579 aaKnown RBP9.83□□□□□ -0.84
CTNND1-208ENST00000428599 LMCD1Q9NZU5 365 aa9.83□□□□□ -0.84
CTNND1-208ENST00000428599 CLTCL1P53675 1640 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 OSBPP22059 807 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 RPS6KA1Q15418 735 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 DPP9Q86TI2 863 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 METTL23Q86XA0 190 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 DIS3L2Q8IYB7 885 aaKnown RBP9.82□□□□□ -0.84
CTNND1-208ENST00000428599 INTS4Q96HW7 963 aaKnown RBP9.82□□□□□ -0.84
CTNND1-208ENST00000428599 SCYL1Q96KG9 808 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 MAPK8IP1Q9UQF2 711 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 ADGRL3Q9HAR2 1447 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 LMNB1P20700 586 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 MYL10Q9BUA6 226 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 HEXIM1O94992 359 aaKnown RBP9.82□□□□□ -0.84
CTNND1-208ENST00000428599 ATP6V1E1P36543 226 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 NXNQ6DKJ4 435 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 JADE1Q6IE81 842 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 NME8Q8N427 588 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 MLKLQ8NB16 471 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 C1orf112Q9NSG2 853 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 CLGNO14967 610 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 POLR2DO15514 142 aaKnown RBP9.82□□□□□ -0.84
CTNND1-208ENST00000428599 TMEM191BP0C7N4 346 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 MAGEA1P43355 309 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 KCTD2Q14681 263 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 XKR9Q5GH70 373 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-208ENST00000428599 POMGNT1Q8WZA1 660 aa9.82□□□□□ -0.84
CTNND1-208ENST00000428599 GARSP41250 739 aaKnown RBP9.81□□□□□ -0.84
CTNND1-208ENST00000428599 LRMPQ12912 555 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 KIAA0825Q8IV33 1275 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 NUB1Q9Y5A7 615 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 ZNF853P0CG23 659 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SCNN1DP51172 638 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 KLHL7Q8IXQ5 586 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SLFN12Q8IYM2 578 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 RYBPQ8N488 228 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-208ENST00000428599 RAB17Q9H0T7 212 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 DNAJC5Q9H3Z4 198 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TROVE2P10155 538 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNND1-208ENST00000428599 IRX4P78413 519 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 PAK2Q13177 524 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 CFAP221Q4G0U5 840 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 FAM47AQ5JRC9 791 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 THRAP3Q9Y2W1 955 aaKnown RBP9.81□□□□□ -0.84
CTNND1-208ENST00000428599 ANGPTL3Q9Y5C1 460 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TXNDC9O14530 226 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TFAP4Q01664 338 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SDCCAG3Q96C92 435 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TEKT3Q9BXF9 490 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SUGCTQ9HAC7 445 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SLC8A2Q9UPR5 921 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 PPEF1O14829 653 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SERPINB2P05120 415 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 SRGAP2BP0DMP2 458 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 INPP1P49441 399 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 LONRF2Q1L5Z9 754 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TMTC4Q5T4D3 741 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TMTC1Q8IUR5 882 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 NELFBQ8WX92 580 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 EAF2Q96CJ1 260 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-208ENST00000428599 AMFRQ9UKV5 643 aa9.81□□□□□ -0.84
CTNND1-208ENST00000428599 TCP10L2B9ZVM9 353 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PPFIA2O75334 1257 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 ARHGAP4P98171 946 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 PPARAQ07869 468 aa9.8□□□□□ -0.84
CTNND1-208ENST00000428599 DENND2CQ68D51 928 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms