RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.65■□□□□ 0.42
GHDC-203ENST00000428494 GBP3Q9H0R5 595 aa17.65■□□□□ 0.42
GHDC-203ENST00000428494 CWC15Q9P013 229 aaKnown RBP17.65■□□□□ 0.42
GHDC-203ENST00000428494 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
GHDC-203ENST00000428494 SYF2O95926 243 aaKnown RBP17.65■□□□□ 0.42
GHDC-203ENST00000428494 KIAA1328Q86T90 577 aa17.65■□□□□ 0.42
GHDC-203ENST00000428494 GPIHBP1Q8IV16 184 aa17.65■□□□□ 0.42
GHDC-203ENST00000428494 NSUN4Q96CB9 384 aaKnown RBP17.65■□□□□ 0.42
GHDC-203ENST00000428494 RRP15Q9Y3B9 282 aaKnown RBP17.65■□□□□ 0.42
GHDC-203ENST00000428494 ANKRD65E5RJM6 399 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
GHDC-203ENST00000428494 MYBL2P10244 700 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 SKIDA1Q1XH10 827 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 INF2Q27J81 1249 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 TSR1Q2NL82 804 aaKnown RBP17.64■□□□□ 0.41
GHDC-203ENST00000428494 CAVIN4Q5BKX8 364 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 ARL6IP4Q66PJ3 421 aaKnown RBP17.64■□□□□ 0.41
GHDC-203ENST00000428494 DTHD1Q6ZMT9 781 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 SRLQ86TD4 932 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 FAM71BQ8TC56 605 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 ERFEQ4G0M1 354 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
GHDC-203ENST00000428494 TFCP2L1Q9NZI6 479 aa17.64■□□□□ 0.41
GHDC-203ENST00000428494 MACROD2A1Z1Q3 448 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 RNF40O75150 1001 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 TRIM21P19474 475 aaKnown RBP17.63■□□□□ 0.41
GHDC-203ENST00000428494 PRDX5P30044 214 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 ITPK1Q13572 414 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 ANKRD18AQ8IVF6 992 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 JAKMIP2Q96AA8 810 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 DUSP9Q99956 384 aaKnown RBP17.63■□□□□ 0.41
GHDC-203ENST00000428494 PYM1Q9BRP8 204 aaKnown RBP17.63■□□□□ 0.41
GHDC-203ENST00000428494 TUBGCP2Q9BSJ2 902 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 MINPP1Q9UNW1 487 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 XIRP1Q702N8 1843 aaKnown RBP17.63■□□□□ 0.41
GHDC-203ENST00000428494 PDS5AQ29RF7 1337 aaKnown RBP17.63■□□□□ 0.41
GHDC-203ENST00000428494 ORC4O43929 436 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 UBA7P41226 1012 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 TTI2Q6NXR4 508 aa17.63■□□□□ 0.41
GHDC-203ENST00000428494 NHEJ1Q9H9Q4 299 aaPredicted RBP17.63■□□□□ 0.41
GHDC-203ENST00000428494 A0A1W2PQC6 194 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 USP17L8P0C7I0 530 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 EEF1GP26641 437 aaKnown RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 MRPS25P82663 173 aaKnown RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 PAPD7Q5XG87 772 aaKnown RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 LRRC31Q6UY01 552 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 KRT26Q7Z3Y9 468 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 CSGALNACT2Q8N6G5 542 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 SMCR8Q8TEV9 937 aaPredicted RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 HPS3Q969F9 1004 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 IL17RBQ9NRM6 502 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 PCDHA4Q9UN74 947 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 CCDC194A0A1B0GVG4 234 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 TBC1D8BQ0IIM8 1120 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 UBE4AQ14139 1066 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 GIMAP8Q8ND71 665 aaPredicted RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 PCMTD1Q96MG8 357 aaPredicted RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 RASSF4Q9H2L5 321 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 MAGEC2Q9UBF1 373 aaPredicted RBP17.62■□□□□ 0.41
GHDC-203ENST00000428494 HPCAL4Q9UM19 191 aa17.62■□□□□ 0.41
GHDC-203ENST00000428494 PSMA7O14818 248 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 PLEKP08567 350 aaPredicted RBP17.61■□□□□ 0.41
GHDC-203ENST00000428494 SRGNP10124 158 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
GHDC-203ENST00000428494 TFAP4Q01664 338 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 ANKRD40Q6AI12 368 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 DYNLL2Q96FJ2 89 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 TTYH3Q9C0H2 523 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 CPVLQ9H3G5 476 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 THAP9Q9H5L6 903 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 JADE2Q9NQC1 790 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 RSPH14Q9UHP6 348 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 FCER1AP12319 257 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 CALML3P27482 149 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 DNM2P50570 870 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 STK4Q13043 487 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 CAGE1Q8TC20 777 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 KAT14Q9H8E8 782 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 EXOC1Q9NV70 894 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 KBTBD4Q9NVX7 518 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
GHDC-203ENST00000428494 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
GHDC-203ENST00000428494 KRT86O43790 486 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 RHOBTB3O94955 611 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 TUBBP07437 444 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
GHDC-203ENST00000428494 KRT83P78385 493 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 C2orf54Q08AI8 447 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 MEA1Q16626 185 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
GHDC-203ENST00000428494 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
GHDC-203ENST00000428494 MED4Q9NPJ6 270 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms