RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
SMC1A-203ENST00000428014 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMC1A-203ENST00000428014 RANBP17Q9H2T7 1088 aaKnown RBP10.73□□□□□ -0.69
SMC1A-203ENST00000428014 CWC22Q9HCG8 908 aaKnown RBP10.73□□□□□ -0.69
SMC1A-203ENST00000428014 FBXO28Q9NVF7 368 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 PFASO15067 1338 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 SYNGAP1Q96PV0 1343 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 BRCA2P51587 3418 aa10.73□□□□□ -0.69
SMC1A-203ENST00000428014 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
SMC1A-203ENST00000428014 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 TMEM232C9JQI7 657 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 ICAM1P05362 532 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 CYP21A2P08686 494 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 SMARCA1P28370 1054 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 SOX10P56693 466 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 MTFR1Q15390 333 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 ZNF792Q3KQV3 632 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 RNF20Q5VTR2 975 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 DPP9Q86TI2 863 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 NCOA7Q8NI08 942 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 ESYT1Q9BSJ8 1104 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 UBAC1Q9BSL1 405 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 HTATIP2Q9BUP3 242 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 IL25Q9H293 177 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
SMC1A-203ENST00000428014 BIN2Q9UBW5 565 aaPredicted RBP10.72□□□□□ -0.69
SMC1A-203ENST00000428014 NEDD4P46934 1319 aa10.72□□□□□ -0.69
SMC1A-203ENST00000428014 ZNFX1Q9P2E3 1918 aaKnown RBP10.72□□□□□ -0.69
SMC1A-203ENST00000428014 ZNF536O15090 1300 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 KDM4AO75164 1064 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 CDC45O75419 566 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 CYBAP13498 195 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 ELNP15502 786 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 CYP2B6P20813 491 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 MCCP23508 829 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 RCAN1P53805 252 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 HAND2P61296 217 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 NKX3-2P78367 333 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 GHRHRQ02643 423 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 NECTIN1Q15223 517 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 SEC23AQ15436 765 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 SNRNP48Q6IEG0 339 aaKnown RBP10.71□□□□□ -0.69
SMC1A-203ENST00000428014 NCAPG2Q86XI2 1143 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
SMC1A-203ENST00000428014 FBXL16Q8N461 479 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
SMC1A-203ENST00000428014 PNMA1Q8ND90 353 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 SHISA4Q96DD7 197 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 TMEM87BQ96K49 555 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 MMP19Q99542 508 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 LSG1Q9H089 658 aaKnown RBP10.71□□□□□ -0.69
SMC1A-203ENST00000428014 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 ACAD9Q9H845 621 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 TOMM22Q9NS69 142 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 PPP4R2Q9NY27 417 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 PRR12Q9ULL5 1215 aa10.71□□□□□ -0.69
SMC1A-203ENST00000428014 CTDP1Q9Y5B0 961 aaPredicted RBP10.71□□□□□ -0.69
SMC1A-203ENST00000428014 TNKSO95271 1327 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 SEPT4O43236 478 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 NMT2O60551 498 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
SMC1A-203ENST00000428014 TIE1P35590 1138 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 LIFRP42702 1097 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-203ENST00000428014 KRT32Q14532 448 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 PRPF38BQ5VTL8 546 aaKnown RBP10.7□□□□□ -0.7
SMC1A-203ENST00000428014 LHX8Q68G74 356 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 RALYLQ86SE5 291 aaKnown RBP10.7□□□□□ -0.7
SMC1A-203ENST00000428014 SP7Q8TDD2 431 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-203ENST00000428014 MORC4Q8TE76 937 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 KCNB2Q92953 911 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 KAT14Q9H8E8 782 aa10.7□□□□□ -0.7
SMC1A-203ENST00000428014 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-203ENST00000428014 ERICH2A1L162 156 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 B4E1Z4 1266 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 E7EWF7 191 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 COBLO75128 1261 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 EN2P19622 333 aaPredicted RBP10.69□□□□□ -0.7
SMC1A-203ENST00000428014 PTH1RQ03431 593 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 PLS1Q14651 629 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 PPP2R5BQ15173 497 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
SMC1A-203ENST00000428014 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
SMC1A-203ENST00000428014 SYDE2Q5VT97 1194 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 C1orf53Q5VUE5 145 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 FAM133AQ8N9E0 248 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 NPLOC4Q8TAT6 608 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 KIFC2Q96AC6 838 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 MTMR8Q96EF0 704 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 NUP88Q99567 741 aaPredicted RBP10.69□□□□□ -0.7
SMC1A-203ENST00000428014 SEZ6LQ9BYH1 1024 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 INCENPQ9NQS7 918 aa10.69□□□□□ -0.7
SMC1A-203ENST00000428014 DDX20Q9UHI6 824 aaKnown RBP10.69□□□□□ -0.7
SMC1A-203ENST00000428014 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
SMC1A-203ENST00000428014 MKI67P46013 3256 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms