RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 LONRF2Q1L5Z9 754 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 TMTC4Q5T4D3 741 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 ABCC4O15439 1325 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 A0A087WWV3 80 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 INO80B-WBP1J3KQ70 363 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 KRT15P19012 456 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 LRRC41Q15345 812 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 CYP26C1Q6V0L0 522 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 SDCCAG8Q86SQ7 713 aaPredicted RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 CCDC170Q8IYT3 715 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 MCUQ8NE86 351 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 INO80BQ9C086 356 aaPredicted RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 CALCOCO1Q9P1Z2 691 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 ESYT2A0FGR8 921 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 PRKAB2O43741 272 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 ATP2B4P23634 1241 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 SFMBT2Q5VUG0 894 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 COA7Q96BR5 231 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 TSR3Q9UJK0 312 aaKnown RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 M0R2C6 588 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 SECISBP2LQ93073 1101 aaKnown RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 RBSNQ9H1K0 784 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 CLIC2O15247 247 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 OSBPP22059 807 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 EVCP57679 992 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 UBE2SQ16763 222 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 DCAF15Q66K64 600 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 CNGA4Q8IV77 575 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 KRT222Q8N1A0 295 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 ARHGEF2Q92974 986 aaKnown RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 RILPQ96NA2 401 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 FAM49AQ9H0Q0 323 aaPredicted RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 DKC1O60832 514 aaKnown RBP eCLIP14.5□□□□□ -0.09
SPG11-202ENST00000427534 TMEM191BP0C7N4 346 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 ADPGKQ9BRR6 497 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 SLITRK6Q9H5Y7 841 aa14.5□□□□□ -0.09
SPG11-202ENST00000427534 ARPP21Q9UBL0 812 aaPredicted RBP14.5□□□□□ -0.09
SPG11-202ENST00000427534 BCRP11274 1271 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 DMP1Q13316 513 aaPredicted RBP14.49□□□□□ -0.09
SPG11-202ENST00000427534 ARMCX5Q6P1M9 558 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 TEKT3Q9BXF9 490 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.49□□□□□ -0.09
SPG11-202ENST00000427534 SRGAP2CP0DJJ0 459 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 DESI2Q9BSY9 194 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
SPG11-202ENST00000427534 SETDB1Q15047 1291 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 POLD4Q9HCU8 107 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 TNKSO95271 1327 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 DYNLT1P63172 113 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 ME3Q16798 604 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 CBX8Q9HC52 389 aa14.49□□□□□ -0.09
SPG11-202ENST00000427534 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.49□□□□□ -0.09
SPG11-202ENST00000427534 F5H423 210 aaPredicted RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 PABPC4Q13310 644 aaKnown RBP eCLIP14.48□□□□□ -0.09
SPG11-202ENST00000427534 MTERF2Q49AM1 385 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
SPG11-202ENST00000427534 PEX26Q7Z412 305 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 PLXNC1O60486 1568 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 TXNDC9O14530 226 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 P4HA1P13674 534 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 SLC9C1Q4G0N8 1177 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 ZNF710Q8N1W2 664 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 TBC1D22AQ8WUA7 517 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 CARD6Q9BX69 1037 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 PLCB4Q15147 1175 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 RNF217Q8TC41 542 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 TTC14Q96N46 770 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 DALRD3Q5D0E6 543 aaKnown RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 IL17REQ8NFR9 667 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 NAPGQ99747 312 aaPredicted RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 ZNF577Q9BSK1 485 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 MRPL11Q9Y3B7 192 aaKnown RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 SH2D4BQ5SQS7 431 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 SMYD4Q8IYR2 804 aaPredicted RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 BLIDQ8IZY5 108 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 DPH5Q9H2P9 285 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 NFE2L3Q9Y4A8 694 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 IBTKQ9P2D0 1353 aaPredicted RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 USP17L8P0C7I0 530 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 SMAD1Q15797 465 aaKnown RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 SEPT12Q8IYM1 358 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 OLA1Q9NTK5 396 aaKnown RBP14.48□□□□□ -0.09
SPG11-202ENST00000427534 KIAA1024Q9UPX6 916 aa14.48□□□□□ -0.09
SPG11-202ENST00000427534 ABCA5Q8WWZ7 1642 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 MYBP10242 640 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 ATP5JP18859 108 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 ALDH3A1P30838 453 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 POLR2FP61218 127 aaKnown RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 HHATQ5VTY9 493 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 PALM2Q8IXS6 379 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 ZBTB38Q8NAP3 1195 aaPredicted RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 CIB2O75838 187 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 PDE6AP16499 860 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 SLFNL1Q499Z3 407 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 CFAP57Q96MR6 1250 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 UBN1Q9NPG3 1134 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 PCDHB4Q9Y5E5 795 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms