RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PAEPP09466 180 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 IDO1P14902 403 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ATP4AP20648 1035 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SCTRP47872 440 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 CTCFP49711 727 aaPredicted RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 MTX1Q13505 466 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 RRS1Q15050 365 aaKnown RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 E2F5Q15329 346 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 PPP1R7Q15435 360 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 USH1GQ495M9 461 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC178Q5BJE1 867 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SPDYCQ5MJ68 293 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 C1QTNF12Q5T7M4 302 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 C6orf89Q6UWU4 347 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 TOGARAM2Q6ZUX3 1019 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 CPLX4Q7Z7G2 160 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 LRRC43Q8N309 656 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SLC35F6Q8N357 371 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 AFAP1Q8N556 730 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC197Q8NCU1 140 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SMC1BQ8NDV3 1235 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAIP1Q8WWC4 291 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 PPP2R3CQ969Q6 453 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 CENPTQ96BT3 561 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 HVCN1Q96D96 273 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SMC6Q96SB8 1091 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 MEIS3Q99687 375 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 TMUB1Q9BVT8 246 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 OSBPL1AQ9BXW6 950 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 KRT23Q9C075 422 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 YIPF3Q9GZM5 350 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 PLEKHA4Q9H4M7 779 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZWILCHQ9H900 591 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 PLCB1Q9NQ66 1216 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 BABAM1Q9NWV8 329 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 STIM2Q9P246 746 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ATXN10Q9UBB4 475 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 BAIAP2L1Q9UHR4 511 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SCOCQ9UIL1 159 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZNF148Q9UQR1 794 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 LUC7L2Q9Y383 392 aaKnown RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 SAMM50Q9Y512 469 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 RBM8AQ9Y5S9 174 aaKnown RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 V9GY48 417 aaPredicted RBP6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 ANKARQ7Z5J8 1434 aa6.22□□□□□ -1.41
VTI1BP4-201ENST00000427516 JCADQ9P266 1359 aa6.21□□□□□ -1.41
VTI1BP4-201ENST00000427516 CACNA1FO60840 1977 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 A0A1B0GTH6 734 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 FAM237AA0A1B0GTK4 181 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 FRMD3A2A2Y4 597 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 A6NHS1 94 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 SPDYE3A6NKU9 549 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 BIRC5O15392 142 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 PRPF3O43395 683 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 TACC1O75410 805 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 LARGE1O95461 756 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 IFIT2P09913 472 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 GNAT1P11488 350 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 ALADP13716 330 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCT6AP40227 531 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 SKIV2L2P42285 1042 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 EIF3BP55884 814 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 RAB15P59190 212 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 ELF3P78545 371 aaPredicted RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 AMPD2Q01433 879 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 KLC1Q07866 573 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 PDCLQ13371 301 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF268Q14587 947 aaPredicted RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 RASA3Q14644 834 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 TAF11Q15544 211 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 SKIDA1Q1XH10 827 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 KBTBD12Q3ZCT8 623 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 AGBL2Q5U5Z8 902 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 C8orf74Q6P047 294 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 HOOK3Q86VS8 718 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 MYLK4Q86YV6 388 aaPredicted RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 NECAB1Q8N987 351 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 SSH3Q8TE77 659 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 TEKT4Q8WW24 435 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF653Q96CK0 615 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 RRP36Q96EU6 259 aaKnown RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF274Q96GC6 653 aaPredicted RBP6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 OLFM3Q96PB7 478 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 NEK1Q96PY6 1258 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 PHOX2BQ99453 314 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 EPC1Q9H2F5 836 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLC12A5Q9H2X9 1139 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 RMI1Q9H9A7 625 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 IL1RAPL1Q9NZN1 696 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 PDP2Q9P2J9 529 aa6.21□□□□□ -1.42
VTI1BP4-201ENST00000427516 MROH2AA6NES4 1674 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 A0A1W2PP64 1363 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ARHGEF28Q8N1W1 1705 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NPATQ14207 1427 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 O00370 1275 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms