RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ATN1P54259 1190 aaPredicted RBP11.99□□□□□ -0.49
COMMD1-202ENST00000427417 CCDC96Q2M329 555 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 MAMDC4Q6UXC1 1216 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 KCTD1Q719H9 257 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 CTNNA3Q9UI47 895 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 MTMR7Q9Y216 660 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 TAL1P17542 331 aaPredicted RBP11.98□□□□□ -0.49
COMMD1-202ENST00000427417 MAGEA10P43363 369 aaPredicted RBP11.98□□□□□ -0.49
COMMD1-202ENST00000427417 IMMTQ16891 758 aaKnown RBP11.98□□□□□ -0.49
COMMD1-202ENST00000427417 CCDC178Q5BJE1 867 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 RNF180Q86T96 592 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 GDF15Q99988 308 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 XPNPEP3Q9NQH7 507 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 HOMER2Q9NSB8 354 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 PNMA2Q9UL42 364 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 LAMA3Q16787 3333 aa11.98□□□□□ -0.49
COMMD1-202ENST00000427417 ZNF536O15090 1300 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 RAD50Q92878 1312 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 ZNF865P0CJ78 1059 aaPredicted RBP11.97□□□□□ -0.49
COMMD1-202ENST00000427417 BMP8BP34820 402 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 IRX6P78412 446 aaPredicted RBP11.97□□□□□ -0.49
COMMD1-202ENST00000427417 LRRC41Q15345 812 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 TTC22Q5TAA0 569 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 BTNL9Q6UXG8 535 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 DGKHQ86XP1 1220 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 TBC1D10CQ8IV04 446 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 LENG1Q96BZ8 264 aaPredicted RBP11.97□□□□□ -0.49
COMMD1-202ENST00000427417 AGBL1Q96MI9 1066 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 ABHD16BQ9H3Z7 469 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
COMMD1-202ENST00000427417 MCM3APO60318 1980 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 ICAM1P05362 532 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 ALAS1P13196 640 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 SNAP25P60880 206 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
COMMD1-202ENST00000427417 ACVR2BQ13705 512 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 SYDE2Q5VT97 1194 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 KRT23Q9C075 422 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 RANBP17Q9H2T7 1088 aaKnown RBP11.96□□□□□ -0.49
COMMD1-202ENST00000427417 CNNM2Q9H8M5 875 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 PRKAG2Q9UGJ0 569 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.49
COMMD1-202ENST00000427417 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
COMMD1-202ENST00000427417 NEDD4P46934 1319 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
COMMD1-202ENST00000427417 ASB14A6NK59 587 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
COMMD1-202ENST00000427417 PDHBP11177 359 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
COMMD1-202ENST00000427417 PDE4AP27815 886 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 RTP1P59025 263 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 GPATCH4Q5T3I0 446 aaKnown RBP11.95□□□□□ -0.5
COMMD1-202ENST00000427417 SLC39A5Q6ZMH5 540 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 FAM133AQ8N9E0 248 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 SPC25Q9HBM1 224 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
COMMD1-202ENST00000427417 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
COMMD1-202ENST00000427417 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.95□□□□□ -0.5
COMMD1-202ENST00000427417 KDM4AO75164 1064 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 DUSP11O75319 330 aaKnown RBP11.94□□□□□ -0.5
COMMD1-202ENST00000427417 PGK1P00558 417 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 SNHG28P0DPA3 235 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 SLC16A2P36021 539 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 ZNF543Q08ER8 600 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 C1orf53Q5VUE5 145 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 TTBK2Q6IQ55 1244 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 ARMCX2Q7L311 632 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 CCDC144CPQ8IYA2 1237 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 NUP133Q8WUM0 1156 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 LBHD1Q9BQE6 289 aaPredicted RBP11.94□□□□□ -0.5
COMMD1-202ENST00000427417 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
COMMD1-202ENST00000427417 UBE2OQ9C0C9 1292 aaKnown RBP11.94□□□□□ -0.5
COMMD1-202ENST00000427417 KAT14Q9H8E8 782 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 PHF24Q9UPV7 400 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 ATP11BQ9Y2G3 1177 aa11.94□□□□□ -0.5
COMMD1-202ENST00000427417 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 MOXD2PA6NHM9 499 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 B4E1Z4 1266 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 ADAMTS4O75173 837 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
COMMD1-202ENST00000427417 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 TRDNQ13061 729 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 SNX17Q15036 470 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 CCDC144BQ3MJ40 725 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 TRIM60Q495X7 471 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 FGD4Q96M96 766 aa11.93□□□□□ -0.5
COMMD1-202ENST00000427417 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms