RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C8orf34Q49A92 452 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 RCSD1Q6JBY9 416 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 USP17L2Q6R6M4 530 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 GADL1Q6ZQY3 521 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 CYB5R4Q7L1T6 521 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 PROCA1Q8NCQ7 364 aaPredicted RBP8.74□□□□□ -1.01
LINC01049-201ENST00000426840 TSC1Q92574 1164 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 ESR2Q92731 530 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 C12orf42Q96LP6 360 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 KRT23Q9C075 422 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 R3HDMLQ9H3Y0 253 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 CNNM2Q9H8M5 875 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 ARHGEF10LQ9HCE6 1279 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 V9GY48 417 aaPredicted RBP8.74□□□□□ -1.01
LINC01049-201ENST00000426840 LAMA4Q16363 1823 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 PDHXO00330 501 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 CA12O43570 354 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 TRPA1O75762 1119 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 TTLL1O95922 423 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 HOXA7P31268 230 aaPredicted RBP8.73□□□□□ -1.01
LINC01049-201ENST00000426840 USP14P54578 494 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 ATP2B2Q01814 1243 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 ADCK5Q3MIX3 580 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 TREML2Q5T2D2 321 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 OTUD7BQ6GQQ9 843 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 MB21D2Q8IYB1 491 aaPredicted RBP8.73□□□□□ -1.01
LINC01049-201ENST00000426840 NCOA7Q8NI08 942 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 TTC14Q96N46 770 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 ZKSCAN3Q9BRR0 538 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 CFHR5Q9BXR6 569 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 VCPKMTQ9H867 229 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 ZCCHC17Q9NP64 241 aaKnown RBP8.73□□□□□ -1.01
LINC01049-201ENST00000426840 TMOD4Q9NZQ9 345 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 AGTPBP1Q9UPW5 1226 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 SLC45A1Q9Y2W3 748 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 SNX14Q9Y5W7 946 aa8.73□□□□□ -1.01
LINC01049-201ENST00000426840 CFAP99D6REC4 459 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 F5H6K3 240 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 TBC1D8O95759 1140 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 ALDH1A1P00352 501 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 HSPA1AP0DMV8 641 aaKnown RBP8.72□□□□□ -1.01
LINC01049-201ENST00000426840 HSPA1BP0DMV9 641 aaKnown RBP8.72□□□□□ -1.01
LINC01049-201ENST00000426840 ANTXR2P58335 489 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 KLRC3Q07444 240 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 TRDNQ13061 729 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 SEC23AQ15436 765 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 CCDC178Q5BJE1 867 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 CATSPERGQ6ZRH7 1159 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 DGKHQ86XP1 1220 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 IGDCC4Q8TDY8 1250 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 ZSCAN10Q96SZ4 725 aaPredicted RBP8.72□□□□□ -1.01
LINC01049-201ENST00000426840 FEZ1Q99689 392 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 TMEM47Q9BQJ4 181 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
LINC01049-201ENST00000426840 SAGE1Q9NXZ1 904 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
LINC01049-201ENST00000426840 USP17L15C9J2P7 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L13C9JLJ4 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L11C9JVI0 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L18D6R9N7 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L22D6RA61 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L17D6RBQ6 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L19D6RCP7 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L20D6RJB6 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 FOXN1O15353 648 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 NDUFB10O96000 172 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 CYP2C8P10632 490 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 TOP1P11387 765 aaKnown RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 ZKSCAN1P17029 563 aaPredicted RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 VCAM1P19320 739 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 EXOSC10Q01780 885 aaKnown RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 USP17L24Q0WX57 530 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 CRHR2Q13324 411 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 TAF1CQ15572 869 aaPredicted RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 CHST3Q7LGC8 479 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 IQCA1Q86XH1 822 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 SPICE1Q8N0Z3 855 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 ENAHQ8N8S7 591 aaPredicted RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 GMCL1P1Q8NEA9 526 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 LPAR1Q92633 364 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 NEK1Q96PY6 1258 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 P2RX7Q99572 595 aaKnown RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 ASCC2Q9H1I8 757 aaPredicted RBP8.71□□□□□ -1.02
LINC01049-201ENST00000426840 SH2D4AQ9H788 454 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 ZFYVE28Q9HCC9 887 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 STX8Q9UNK0 236 aa8.71□□□□□ -1.02
LINC01049-201ENST00000426840 MYH4Q9Y623 1939 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 IFIT3O14879 490 aaKnown RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 ZBTB24O43167 697 aaPredicted RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 PRC1O43663 620 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 TLR2O60603 784 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 HSPA8P11142 646 aaKnown RBP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 MCCP23508 829 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 MCM5P33992 734 aa8.7□□□□□ -1.02
LINC01049-201ENST00000426840 PABPC4Q13310 644 aaKnown RBP eCLIP8.7□□□□□ -1.02
LINC01049-201ENST00000426840 KRT32Q14532 448 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms