RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 TMEM232C9JQI7 657 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 PQBP1O60828 265 aaKnown RBP15.3■□□□□ 0.04
NELFE-203ENST00000426722 GJA9P57773 515 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 NKX3-2P78367 333 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 FPGSQ05932 587 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 FAAP100Q0VG06 881 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 KCNA10Q16322 511 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
NELFE-203ENST00000426722 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 SEC62Q99442 399 aaKnown RBP15.3■□□□□ 0.04
NELFE-203ENST00000426722 UPF3AQ9H1J1 476 aaKnown RBP15.3■□□□□ 0.04
NELFE-203ENST00000426722 ACAD9Q9H845 621 aa15.3■□□□□ 0.04
NELFE-203ENST00000426722 C6orf222P0C671 652 aaPredicted RBP15.29■□□□□ 0.04
NELFE-203ENST00000426722 ITGB8P26012 769 aa15.29■□□□□ 0.04
NELFE-203ENST00000426722 SLC1A4P43007 532 aa15.29■□□□□ 0.04
NELFE-203ENST00000426722 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
NELFE-203ENST00000426722 ARMCX2Q7L311 632 aa15.29■□□□□ 0.04
NELFE-203ENST00000426722 RNPC3Q96LT9 517 aaKnown RBP15.29■□□□□ 0.04
NELFE-203ENST00000426722 FAM161BQ96MY7 647 aa15.29■□□□□ 0.04
NELFE-203ENST00000426722 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
NELFE-203ENST00000426722 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
NELFE-203ENST00000426722 ASB14A6NK59 587 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 TIMP1P01033 207 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 ASGR1P07306 291 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 MX1P20591 662 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 CDK7P50613 346 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 RCSD1Q6JBY9 416 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 CCDC174Q6PII3 467 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.28■□□□□ 0.04
NELFE-203ENST00000426722 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 LENG1Q96BZ8 264 aaPredicted RBP15.28■□□□□ 0.04
NELFE-203ENST00000426722 FGD4Q96M96 766 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 CDX2Q99626 313 aaPredicted RBP15.28■□□□□ 0.04
NELFE-203ENST00000426722 SEZ6LQ9BYH1 1024 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
NELFE-203ENST00000426722 PCDHB15Q9Y5E8 787 aa15.28■□□□□ 0.04
NELFE-203ENST00000426722 A0A0U1RQG5 324 aaPredicted RBP15.27■□□□□ 0.04
NELFE-203ENST00000426722 TSPY2A6NKD2 308 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 ARVCFO00192 962 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 TLR3O15455 904 aaKnown RBP15.27■□□□□ 0.04
NELFE-203ENST00000426722 IKQ13123 557 aaPredicted RBP15.27■□□□□ 0.04
NELFE-203ENST00000426722 MFSD5Q6N075 450 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 CCDC144CPQ8IYA2 1237 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 KATNBL1Q9H079 304 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 RNF146Q9NTX7 359 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 ANAPC4Q9UJX5 808 aa15.27■□□□□ 0.04
NELFE-203ENST00000426722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.27■□□□□ 0.04
NELFE-203ENST00000426722 COL6A3P12111 3177 aa15.27■□□□□ 0.03
NELFE-203ENST00000426722 DNAH12Q6ZR08 3092 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 ZNF536O15090 1300 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 MYADML2A6NDP7 307 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 CABYRO75952 493 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 MCCP23508 829 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 NOVP48745 357 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 PPIGQ13427 754 aaKnown RBP eCLIP15.26■□□□□ 0.031e-7■■■■■ 27.7
NELFE-203ENST00000426722 GNASQ5JWF2 1037 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 VTI1AQ96AJ9 217 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 EVI5LQ96CN4 794 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
NELFE-203ENST00000426722 HELLSQ9NRZ9 838 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 TBX21Q9UL17 535 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 ISY1Q9ULR0 285 aaKnown RBP15.26■□□□□ 0.03
NELFE-203ENST00000426722 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
NELFE-203ENST00000426722 SALL3Q9BXA9 1300 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 ADCY6O43306 1168 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 FGRP09769 529 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 EPHB4P54760 987 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 TNFAIP2Q03169 654 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 ALX1Q15699 326 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 TMEM199Q8N511 208 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 AGBL1Q96MI9 1066 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 TTYH1Q9H313 450 aaPredicted RBP15.25■□□□□ 0.03
NELFE-203ENST00000426722 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 Q9Y3F1 56 aa15.25■□□□□ 0.03
NELFE-203ENST00000426722 LOC102724159A0A0B4J2E5 919 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 ORC4O43929 436 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 ZEB2O60315 1214 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 ALAS1P13196 640 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 CNTN2Q02246 1040 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 PWP2Q15269 919 aaKnown RBP15.24■□□□□ 0.03
NELFE-203ENST00000426722 IQSEC1Q6DN90 963 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 MAFAQ8NHW3 353 aaPredicted RBP15.24■□□□□ 0.03
NELFE-203ENST00000426722 OTUD7AQ8TE49 926 aaPredicted RBP15.24■□□□□ 0.03
NELFE-203ENST00000426722 DCAF4Q8WV16 495 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 IL17RBQ9NRM6 502 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 PNMA2Q9UL42 364 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 PRR12Q9ULL5 1215 aa15.24■□□□□ 0.03
NELFE-203ENST00000426722 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
NELFE-203ENST00000426722 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 CTAGE5O15320 804 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 FOXP2O15409 715 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 RANBP6O60518 1105 aaKnown RBP15.23■□□□□ 0.03
NELFE-203ENST00000426722 CTDSPL2Q05D32 466 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 FAM126BQ8IXS8 530 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
NELFE-203ENST00000426722 COL25A1Q9BXS0 654 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms