RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 BMP8BP34820 402 aa29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 MDM2Q00987 491 aaPredicted RBP29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 RCSD1Q6JBY9 416 aa29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 CWC27Q6UX04 472 aaKnown RBP29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 CHST13Q8NET6 341 aa29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 FBXO40Q9UH90 709 aa29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 ZHX1Q9UKY1 873 aaPredicted RBP29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 LAMA3Q16787 3333 aa29.5■■■□□ 2.31
PTPMT1-203ENST00000426530 NOVP48745 357 aa29.49■■■□□ 2.31
PTPMT1-203ENST00000426530 LRCH3Q96II8 777 aa29.49■■■□□ 2.31
PTPMT1-203ENST00000426530 DIAPH3Q9NSV4 1193 aa29.49■■■□□ 2.31
PTPMT1-203ENST00000426530 RNF146Q9NTX7 359 aa29.49■■■□□ 2.31
PTPMT1-203ENST00000426530 PRR12Q9ULL5 1215 aa29.49■■■□□ 2.31
PTPMT1-203ENST00000426530 SYNGAP1Q96PV0 1343 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 AKR1A1P14550 325 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 CNTN2Q02246 1040 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 SLC39A5Q6ZMH5 540 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 TMEM47Q9BQJ4 181 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 UBE2OQ9C0C9 1292 aaKnown RBP29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 ACAD9Q9H845 621 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 LTBP2Q14767 1821 aa29.48■■■□□ 2.31
PTPMT1-203ENST00000426530 FRMPD2Q68DX3 1309 aaPredicted RBP29.47■■■□□ 2.31
PTPMT1-203ENST00000426530 FDX1P10109 184 aa29.47■■■□□ 2.31
PTPMT1-203ENST00000426530 ALAS1P13196 640 aa29.47■■■□□ 2.31
PTPMT1-203ENST00000426530 AKNAD1Q5T1N1 836 aa29.47■■■□□ 2.31
PTPMT1-203ENST00000426530 TTBK2Q6IQ55 1244 aa29.47■■■□□ 2.31
PTPMT1-203ENST00000426530 MAMDC4Q6UXC1 1216 aa29.47■■■□□ 2.31
PTPMT1-203ENST00000426530 NEDD4P46934 1319 aa29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 SLC16A2P36021 539 aa29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 MFAP1P55081 439 aaKnown RBP29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 TRIM60Q495X7 471 aa29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 MSL3Q8N5Y2 521 aaKnown RBP29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 DCAF4Q8WV16 495 aa29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 A1CFQ9NQ94 594 aaKnown RBP29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.46■■■□□ 2.31
PTPMT1-203ENST00000426530 PLA2G6O60733 806 aa29.45■■■□□ 2.31
PTPMT1-203ENST00000426530 TOP1P11387 765 aaKnown RBP29.45■■■□□ 2.31
PTPMT1-203ENST00000426530 PDE4AP27815 886 aa29.45■■■□□ 2.31
PTPMT1-203ENST00000426530 MFSD6Q6ZSS7 791 aa29.45■■■□□ 2.31
PTPMT1-203ENST00000426530 ZNF467Q7Z7K2 595 aaPredicted RBP29.45■■■□□ 2.31
PTPMT1-203ENST00000426530 GPCPD1Q9NPB8 672 aa29.45■■■□□ 2.31
PTPMT1-203ENST00000426530 LCTP09848 1927 aa29.44■■■□□ 2.3
PTPMT1-203ENST00000426530 MUM1L1Q5H9M0 696 aa29.44■■■□□ 2.3
PTPMT1-203ENST00000426530 RNF180Q86T96 592 aa29.44■■■□□ 2.3
PTPMT1-203ENST00000426530 TRERF1Q96PN7 1200 aa29.44■■■□□ 2.3
PTPMT1-203ENST00000426530 PHF24Q9UPV7 400 aa29.44■■■□□ 2.3
PTPMT1-203ENST00000426530 SYNRGQ9UMZ2 1314 aa29.44■■■□□ 2.3
PTPMT1-203ENST00000426530 POTEB2H3BUK9 544 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 ADCY6O43306 1168 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 ADAMTS4O75173 837 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 IRX5P78411 483 aaPredicted RBP29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 ARMCX2Q7L311 632 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 TDHQ8IZJ6 230 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 ZKSCAN3Q9BRR0 538 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 PRDM5Q9NQX1 630 aaPredicted RBP29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 TCP11L1Q9NUJ3 509 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 FAM184BQ9ULE4 1060 aa29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 DDX49Q9Y6V7 483 aaKnown RBP29.43■■■□□ 2.3
PTPMT1-203ENST00000426530 LRRC37A2A6NM11 1700 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 ACVR2BQ13705 512 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 SNX17Q15036 470 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 CCDC144CPQ8IYA2 1237 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 FAM133AQ8N9E0 248 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 IL25Q9H293 177 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 CCPG1Q9ULG6 757 aa29.42■■■□□ 2.3
PTPMT1-203ENST00000426530 MYADML2A6NDP7 307 aa29.41■■■□□ 2.3
PTPMT1-203ENST00000426530 SOWAHBA6NEL2 793 aa29.41■■■□□ 2.3
PTPMT1-203ENST00000426530 ZNF213O14771 459 aa29.41■■■□□ 2.3
PTPMT1-203ENST00000426530 PRKAG2Q9UGJ0 569 aa29.41■■■□□ 2.3
PTPMT1-203ENST00000426530 A0A1W2PQ45 241 aaPredicted RBP29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 A0A1W2PQY0 241 aa29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 PDHBP11177 359 aa29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 TKFCQ3LXA3 575 aa29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 SYDE2Q5VT97 1194 aa29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 LBHD1Q9BQE6 289 aaPredicted RBP29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 RANBP17Q9H2T7 1088 aaKnown RBP29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 RNF41Q9H4P4 317 aaPredicted RBP29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 ASTN1O14525 1302 aa29.4■■■□□ 2.3
PTPMT1-203ENST00000426530 HIP1O00291 1037 aa29.39■■■□□ 2.3
PTPMT1-203ENST00000426530 GSPT1P15170 499 aaKnown RBP29.39■■■□□ 2.3
PTPMT1-203ENST00000426530 CCDC144BQ3MJ40 725 aa29.39■■■□□ 2.3
PTPMT1-203ENST00000426530 ESR2Q92731 530 aa29.39■■■□□ 2.3
PTPMT1-203ENST00000426530 ABHD16BQ9H3Z7 469 aa29.39■■■□□ 2.3
PTPMT1-203ENST00000426530 ICAM1P05362 532 aa29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 PCP11498 1178 aaKnown RBP29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 BTNL9Q6UXG8 535 aa29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 NSMFQ6X4W1 530 aa29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 SH3RF1Q7Z6J0 888 aa29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 PURBQ96QR8 312 aaKnown RBP29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 KATNBL1Q9H079 304 aa29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 PDLIM7Q9NR12 457 aa29.38■■■□□ 2.29
PTPMT1-203ENST00000426530 CYP39A1Q9NYL5 469 aa29.37■■■□□ 2.29
PTPMT1-203ENST00000426530 KDM4AO75164 1064 aa29.36■■■□□ 2.29
PTPMT1-203ENST00000426530 DUSP11O75319 330 aaKnown RBP29.36■■■□□ 2.29
PTPMT1-203ENST00000426530 ACLYP53396 1101 aa29.36■■■□□ 2.29
PTPMT1-203ENST00000426530 TLE2Q04725 743 aa29.36■■■□□ 2.29
PTPMT1-203ENST00000426530 ZNF543Q08ER8 600 aa29.36■■■□□ 2.29
PTPMT1-203ENST00000426530 TTC22Q5TAA0 569 aa29.36■■■□□ 2.29
PTPMT1-203ENST00000426530 KLHDC9Q8NEP7 349 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms