RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SLC4A3P48751 1232 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 CDK8P49336 464 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 CXCL17Q6UXB2 119 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.32
HDAC6-206ENST00000426196 ARMCX2Q7L311 632 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 ANKRD35Q8N283 1001 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
HDAC6-206ENST00000426196 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
HDAC6-206ENST00000426196 TLL1O43897 1013 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 NKX3-2P78367 333 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 BEX3Q00994 111 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 C16orf86Q6ZW13 317 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 AACSQ86V21 672 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 HLA-CQ95604 372 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 WNT8AQ9H1J5 351 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 FBXO40Q9UH90 709 aa17.07■□□□□ 0.32
HDAC6-206ENST00000426196 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 RFXAPO00287 272 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 CTAGE5O15320 804 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 ZEB2O60315 1214 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 CA3P07451 260 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 PFKMP08237 780 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 TNFAIP2Q03169 654 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.06■□□□□ 0.32
HDAC6-206ENST00000426196 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 DDRGK1Q96HY6 314 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
HDAC6-206ENST00000426196 WDFY4Q6ZS81 3184 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 TCRBV5S4A2TA0A5A2 114 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 FAM86C2PA6NEL3 165 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 ATP2A1O14983 1001 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 ZBED4O75132 1171 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 FSCN1Q16658 493 aaKnown RBP17.05■□□□□ 0.32
HDAC6-206ENST00000426196 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 TLK2Q86UE8 772 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 ALYREFQ86V81 257 aaKnown RBP17.05■□□□□ 0.32
HDAC6-206ENST00000426196 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
HDAC6-206ENST00000426196 FGD4Q96M96 766 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 NUP88Q99567 741 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-206ENST00000426196 AP5M1Q9H0R1 490 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 CERS4Q9HA82 394 aa17.05■□□□□ 0.32
HDAC6-206ENST00000426196 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-206ENST00000426196 MYH7P12883 1935 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 CYP2D7A0A087X1C5 515 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 B4GALT4O60513 344 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 MBD4O95243 580 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 CHST13Q8NET6 341 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 SCLYQ96I15 445 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 DNAJC2Q99543 621 aaKnown RBP17.04■□□□□ 0.32
HDAC6-206ENST00000426196 KATNBL1Q9H079 304 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 C11orf16Q9NQ32 467 aa17.04■□□□□ 0.32
HDAC6-206ENST00000426196 USP17L12C9JPN9 530 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 USP17L21D6R901 530 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 GOLIM4O00461 696 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 PRKAB2O43741 272 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 ACTN1P12814 892 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 TTLL4Q14679 1199 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 KRT40Q6A162 431 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 ARNTL2Q8WYA1 636 aa17.03■□□□□ 0.32
HDAC6-206ENST00000426196 RAVER2Q9HCJ3 691 aaKnown RBP17.03■□□□□ 0.32
HDAC6-206ENST00000426196 ASTN1O14525 1302 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 COL4A4P53420 1690 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-206ENST00000426196 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-206ENST00000426196 EPOPA6NHQ4 379 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 SMIM22K7EJ46 135 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDAC6-206ENST00000426196 KIFC2Q96AC6 838 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 SLC9A7Q96T83 725 aa17.02■□□□□ 0.32
HDAC6-206ENST00000426196 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
HDAC6-206ENST00000426196 KIF28PB7ZC32 967 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 F5H6K3 240 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 PI4K2BG5E9Z4 385 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 NDUFB10O96000 172 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 SUPT20HL2P0C7V6 817 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 KLRC3Q07444 240 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 DEFB128Q7Z7B8 93 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.01■□□□□ 0.31
HDAC6-206ENST00000426196 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
HDAC6-206ENST00000426196 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
HDAC6-206ENST00000426196 ASB14A6NK59 587 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
HDAC6-206ENST00000426196 OAZ1P54368 228 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 PSMC6P62333 389 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 TAP1Q03518 808 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 PHOSPHO2Q8TCD6 241 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 VWCEQ96DN2 955 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 TANC1Q9C0D5 1861 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms