RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
VEGFB-202ENST00000426086 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
VEGFB-202ENST00000426086 ZNF467Q7Z7K2 595 aaPredicted RBP16.28■□□□□ 0.2
VEGFB-202ENST00000426086 PCSK9Q8NBP7 692 aaKnown RBP16.28■□□□□ 0.2
VEGFB-202ENST00000426086 IL23AQ9NPF7 189 aa16.28■□□□□ 0.2
VEGFB-202ENST00000426086 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.2
VEGFB-202ENST00000426086 MYO9BQ13459 2157 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 GRIN2DO15399 1336 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 CXCL17Q6UXB2 119 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
VEGFB-202ENST00000426086 OTOP2Q7RTS6 562 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 KIF1BPQ96EK5 621 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 NYAP2Q9P242 653 aa16.27■□□□□ 0.2
VEGFB-202ENST00000426086 MYH7P12883 1935 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 CCL23P55773 120 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 NKX3-2P78367 333 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 TFF2Q03403 129 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 RAB30Q15771 203 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
VEGFB-202ENST00000426086 SLC43A3Q8NBI5 491 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 HAUS7Q99871 368 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 WNT8AQ9H1J5 351 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 MSRAQ9UJ68 235 aa16.26■□□□□ 0.19
VEGFB-202ENST00000426086 MUC3AQ02505 3323 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 TLR3O15455 904 aaKnown RBP16.25■□□□□ 0.19
VEGFB-202ENST00000426086 FGBP02675 491 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 BMP1P13497 986 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 ATP5JP18859 108 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 PLA2G5P39877 138 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 HIPK3Q9H422 1215 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 SLC28A3Q9HAS3 691 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
VEGFB-202ENST00000426086 SOWAHBA6NEL2 793 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 GSG1L2A8MUP6 293 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 KCNQ1P51787 676 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 NOC4LQ9BVI4 516 aaKnown RBP16.24■□□□□ 0.19
VEGFB-202ENST00000426086 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 SPC25Q9HBM1 224 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 GNEQ9Y223 722 aaKnown RBP16.24■□□□□ 0.19
VEGFB-202ENST00000426086 LRRC37A2A6NM11 1700 aa16.24■□□□□ 0.19
VEGFB-202ENST00000426086 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 RFXAPO00287 272 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 B4GALT4O60513 344 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 ZBED4O75132 1171 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 PSMC6P62333 389 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 TNFAIP2Q03169 654 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 ITGA7Q13683 1181 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 SBK1Q52WX2 424 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 LRRC47Q8N1G4 583 aaKnown RBP16.23■□□□□ 0.19
VEGFB-202ENST00000426086 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 FAM133AQ8N9E0 248 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 SCLYQ96I15 445 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
VEGFB-202ENST00000426086 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■■■■□ 20.5
VEGFB-202ENST00000426086 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
VEGFB-202ENST00000426086 ARPP21Q9UBL0 812 aaPredicted RBP16.23■□□□□ 0.19
VEGFB-202ENST00000426086 PRDM1O75626 825 aa16.22■□□□□ 0.19
VEGFB-202ENST00000426086 SMPD1P17405 629 aa16.22■□□□□ 0.19
VEGFB-202ENST00000426086 CHST13Q8NET6 341 aa16.22■□□□□ 0.19
VEGFB-202ENST00000426086 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
VEGFB-202ENST00000426086 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
VEGFB-202ENST00000426086 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
VEGFB-202ENST00000426086 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
VEGFB-202ENST00000426086 ZNF536O15090 1300 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 PPP2R2DQ66LE6 453 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 KRT40Q6A162 431 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
VEGFB-202ENST00000426086 TLK2Q86UE8 772 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 AGBL1Q96MI9 1066 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 PURBQ96QR8 312 aaKnown RBP16.21■□□□□ 0.19
VEGFB-202ENST00000426086 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
VEGFB-202ENST00000426086 A1CFQ9NQ94 594 aaKnown RBP16.21■□□□□ 0.19
VEGFB-202ENST00000426086 EPOPA6NHQ4 379 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 DYNC1LI2O43237 492 aaPredicted RBP16.2■□□□□ 0.18
VEGFB-202ENST00000426086 ARHGEF15O94989 841 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 TTLL4Q14679 1199 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 FSCN1Q16658 493 aaKnown RBP16.2■□□□□ 0.18
VEGFB-202ENST00000426086 EEPD1Q7L9B9 569 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 RPAP2Q8IXW5 612 aaPredicted RBP16.2■□□□□ 0.18
VEGFB-202ENST00000426086 OSBP2Q969R2 916 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 MKL1Q969V6 931 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 FAM122AQ96E09 287 aa16.2■□□□□ 0.18
VEGFB-202ENST00000426086 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms