RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RANBP17Q9H2T7 1088 aaKnown RBP21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 HOMER2Q9NSB8 354 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 FBXO40Q9UH90 709 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 TAF6LQ9Y6J9 622 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 MSCO60682 206 aa21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 SNAI1O95863 264 aaPredicted RBP21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 CYP21A2P08686 494 aa21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 ZNF865P0CJ78 1059 aaPredicted RBP21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 SYDE2Q5VT97 1194 aa21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 MAMDC4Q6UXC1 1216 aa21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 ENAHQ8N8S7 591 aaPredicted RBP21.56■■□□□ 1.04
SMARCAL1-205ENST00000425815 TKFCQ3LXA3 575 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 MUM1L1Q5H9M0 696 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 CYB5R4Q7L1T6 521 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 IQCA1Q86XH1 822 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 ANKRD35Q8N283 1001 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 MAP4K1Q92918 833 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 TRERF1Q96PN7 1200 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 KRT23Q9C075 422 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 RNF146Q9NTX7 359 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 NRBP1Q9UHY1 535 aa21.55■■□□□ 1.04
SMARCAL1-205ENST00000425815 EVI5O60447 810 aa21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 ALAS1P13196 640 aa21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 CNTN2Q02246 1040 aa21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 CCDC178Q5BJE1 867 aa21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 ZNF467Q7Z7K2 595 aaPredicted RBP21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 MSL3Q8N5Y2 521 aaKnown RBP21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 ACAD9Q9H845 621 aa21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 A1CFQ9NQ94 594 aaKnown RBP21.54■■□□□ 1.04
SMARCAL1-205ENST00000425815 ICAM1P05362 532 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 GOLGA8HP0CJ92 632 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 FAM133AQ8N9E0 248 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 PNMA1Q8ND90 353 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 CNNM2Q9H8M5 875 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 COLQQ9Y215 455 aaPredicted RBP21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 TNKSO95271 1327 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 SYNGAP1Q96PV0 1343 aa21.53■■□□□ 1.04
SMARCAL1-205ENST00000425815 SOWAHBA6NEL2 793 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 SEC23AQ15436 765 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 GJC2Q5T442 439 aaPredicted RBP21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 STOX1Q6ZVD7 989 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 UBA5Q9GZZ9 404 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 CPVLQ9H3G5 476 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 CCPG1Q9ULG6 757 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 NR2E3Q9Y5X4 410 aa21.52■■□□□ 1.04
SMARCAL1-205ENST00000425815 DNM1LO00429 736 aa21.51■■□□□ 1.03
SMARCAL1-205ENST00000425815 LRRC26Q2I0M4 334 aa21.51■■□□□ 1.03
SMARCAL1-205ENST00000425815 KAT14Q9H8E8 782 aa21.51■■□□□ 1.03
SMARCAL1-205ENST00000425815 ASTN1O14525 1302 aa21.51■■□□□ 1.03
SMARCAL1-205ENST00000425815 POTEB2H3BUK9 544 aa21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 HABP4Q5JVS0 413 aaKnown RBP21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 PURBQ96QR8 312 aaKnown RBP21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 SENP6Q9GZR1 1112 aaPredicted RBP21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 KATNBL1Q9H079 304 aa21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 PRO3102Q9H379 93 aa21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 CYP39A1Q9NYL5 469 aa21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 ZNFX1Q9P2E3 1918 aaKnown RBP21.5■■□□□ 1.03
SMARCAL1-205ENST00000425815 E7EWF7 191 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 LRRC41Q15345 812 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 BMP2KLQ5H9B9 411 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 GPATCH4Q5T3I0 446 aaKnown RBP21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 C7orf61Q8IZ16 206 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 ARRDC4Q8NCT1 418 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 CLEC4DQ8WXI8 215 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 LENG1Q96BZ8 264 aaPredicted RBP21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 ESYT1Q9BSJ8 1104 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 DDX49Q9Y6V7 483 aaKnown RBP21.49■■□□□ 1.03
SMARCAL1-205ENST00000425815 LAMA4Q16363 1823 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 ACVR2BQ13705 512 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 CHRDL2Q6WN34 429 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 ARMCX2Q7L311 632 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 UBAC1Q9BSL1 405 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 SENP2Q9HC62 589 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 PCDH10Q9P2E7 1040 aa21.48■■□□□ 1.03
SMARCAL1-205ENST00000425815 NFIBO00712 420 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 ADCY6O43306 1168 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 PGK1P00558 417 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 RARBP10826 455 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 AKR1A1P14550 325 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 IFIT1BQ5T764 474 aaKnown RBP21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 XPNPEP3Q9NQH7 507 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 FAM184BQ9ULE4 1060 aa21.47■■□□□ 1.03
SMARCAL1-205ENST00000425815 ANTXR2P58335 489 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 TRDNQ13061 729 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 BAATQ14032 418 aaPredicted RBP21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 COL9A3Q14050 684 aaPredicted RBP21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 NSMFQ6X4W1 530 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 CHST3Q7LGC8 479 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 ADGRF4Q8IZF3 695 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 STAG2Q8N3U4 1231 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 ABHD16BQ9H3Z7 469 aa21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 ZHX1Q9UKY1 873 aaPredicted RBP21.46■■□□□ 1.03
SMARCAL1-205ENST00000425815 ZMYND8Q9ULU4 1186 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms