RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 KRT86O43790 486 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 CYLC1P35663 651 aaPredicted RBP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 MATR3P43243 847 aaKnown RBP eCLIP8.43□□□□□ -1.064e-7■■■□□ 18.1
SMARCC1-202ENST00000425518 UBE4AQ14139 1066 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 ARL6IP4Q66PJ3 421 aaKnown RBP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 C4orf32Q8N8J7 132 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 FAM71BQ8TC56 605 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 CELF1Q92879 486 aaKnown RBP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 NSUN4Q96CB9 384 aaKnown RBP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 CPVLQ9H3G5 476 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 CAPN11Q9UMQ6 739 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 PCDHA4Q9UN74 947 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 RCCD1A6NED2 376 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 RNF40O75150 1001 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 TUBBP07437 444 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 GOLGA8HP0CJ92 632 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 IDEP14735 1019 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 DNM2P50570 870 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 PDE4DQ08499 809 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 PNMA1Q8ND90 353 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 HPS3Q969F9 1004 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 NHEJ1Q9H9Q4 299 aaPredicted RBP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 MKNK2Q9HBH9 465 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 STX8Q9UNK0 236 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 RRP15Q9Y3B9 282 aaKnown RBP8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 LOC102724428A0A0B4J2F2 783 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 USP17L3A6NCW0 530 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 USP17L4A6NCW7 530 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 PSMD14O00487 310 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 EEF1GP26641 437 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 KCNQ4P56696 695 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 SIK1P57059 783 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 ASIC1P78348 528 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 ITPK1Q13572 414 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 USP17L1Q7RTZ2 530 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 KRT26Q7Z3Y9 468 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 PSMB7Q99436 277 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 CRACR2AQ9BSW2 395 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 NOC4LQ9BVI4 516 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 RASSF4Q9H2L5 321 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 VAT1LQ9HCJ6 419 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 EXOC1Q9NV70 894 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC96Q2M329 555 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 LETM2Q2VYF4 491 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 RCSD1Q6JBY9 416 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF507Q8TCN5 953 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 SMCR8Q8TEV9 937 aaPredicted RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 DNAJC7Q99615 494 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF804BA4D1E1 1349 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 PARP4Q9UKK3 1724 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 ORC4O43929 436 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 IVLP07476 585 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 FGRP09769 529 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 PCP11498 1178 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 KIF5AQ12840 1032 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 STK4Q13043 487 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 MAP9Q49MG5 647 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 ANKRD40Q6AI12 368 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 WDR93Q6P2C0 686 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC47Q96A33 483 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 CNOT6LQ96LI5 555 aaKnown RBP8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC42Q96M95 316 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 THAP9Q9H5L6 903 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 TCP11L1Q9NUJ3 509 aa8.42□□□□□ -1.06
SMARCC1-202ENST00000425518 DDX60Q8IY21 1712 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 A0A1W2PQC6 194 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 PDE2AO00408 941 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 KLRC4O43908 158 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 FCER1AP12319 257 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 PLCG1P19174 1290 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 HIBADHP31937 336 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 SPA17Q15506 151 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 FKBP15Q5T1M5 1219 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 SRLQ86TD4 932 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 BSDC1Q9NW68 430 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 PCDHA6Q9UN73 950 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 PCDHA8Q9Y5H6 950 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 XIRP1Q702N8 1843 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 PLEKP08567 350 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 SRGNP10124 158 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 TTI2Q6NXR4 508 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 CABP7Q86V35 215 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 DZIP1Q86YF9 867 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 GIMAP8Q8ND71 665 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 AFAP1L1Q8TED9 768 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 SMARCC1Q92922 1105 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 RABEP2Q9H5N1 569 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 MED4Q9NPJ6 270 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 ATP8A2Q9NTI2 1148 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 LRWD1Q9UFC0 647 aa8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 PDS5AQ29RF7 1337 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 CCNT1O60563 726 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 CKAP4Q07065 602 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-202ENST00000425518 TXNRD1Q16881 649 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms