RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 C1orf53Q5VUE5 145 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 KCTD1Q719H9 257 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 GMCL1P1Q8NEA9 526 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 KLHDC9Q8NEP7 349 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 MKL1Q969V6 931 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 PURBQ96QR8 312 aaKnown RBP13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 FEM1BQ9UK73 627 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 ASTN1O14525 1302 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 ZNF536O15090 1300 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
TRBV22-1-201ENST00000424543 ATP2A1O14983 1001 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 RAG1P15918 1043 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 MX1P20591 662 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 BEX3Q00994 111 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 IKQ13123 557 aaPredicted RBP13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 MAMDC4Q6UXC1 1216 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 CCDC144CPQ8IYA2 1237 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 KATNBL1Q9H079 304 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 A1CFQ9NQ94 594 aaKnown RBP13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 RNF146Q9NTX7 359 aa13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRBV22-1-201ENST00000424543 SOWAHBA6NEL2 793 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 KIAA0355O15063 1070 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 ERC2O15083 957 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 PDE4BQ07343 736 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 IL17RBQ9NRM6 502 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
TRBV22-1-201ENST00000424543 CHD9Q3L8U1 2897 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 CTAGE5O15320 804 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 DUSP11O75319 330 aaKnown RBP13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 ASGR1P07306 291 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 ALAS1P13196 640 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 SLC1A4P43007 532 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 STAT2P52630 851 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 FPGSQ05932 587 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 TTBK2Q6IQ55 1244 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 EEPD1Q7L9B9 569 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 CHST13Q8NET6 341 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 COL25A1Q9BXS0 654 aaPredicted RBP13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 ACAD9Q9H845 621 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 ZNF287Q9HBT7 754 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 REV3LO60673 3130 aa13.86□□□□□ -0.19
TRBV22-1-201ENST00000424543 CHD7Q9P2D1 2997 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 TSPY2A6NKD2 308 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 RANBP6O60518 1105 aaKnown RBP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 SLC16A2P36021 539 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 FBXO16Q8IX29 292 aaPredicted RBP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 FAM133AQ8N9E0 248 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 VTI1AQ96AJ9 217 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 TSEN34Q9BSV6 310 aaKnown RBP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 PDGFCQ9NRA1 345 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 TBX21Q9UL17 535 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 MYH6P13533 1939 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 LAMA4Q16363 1823 aa13.85□□□□□ -0.19
TRBV22-1-201ENST00000424543 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 GRXCR1A8MXD5 290 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 DCDC2CA8MYV0 355 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 ACRP10323 421 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 OAZ1P54368 228 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 GJA9P57773 515 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 SMAD3P84022 425 aaKnown RBP13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 RRP12Q5JTH9 1297 aaKnown RBP13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 GNASQ5JWF2 1037 aa13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 MAFAQ8NHW3 353 aaPredicted RBP13.84□□□□□ -0.19
TRBV22-1-201ENST00000424543 NUP133Q8WUM0 1156 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms