RNA–Protein interactions for RNA: ENST00000422944.1

HCG20-207, Transcript of HLA complex group 20, humanhuman

TSL 2

Gene HCG20, Length 1,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-207ENST00000422944 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 NBPF11Q86T75 865 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 CCDC82Q8N4S0 544 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 SMCR8Q8TEV9 937 aaPredicted RBP11.53□□□□□ -0.56
HCG20-207ENST00000422944 NUP88Q99567 741 aaPredicted RBP11.53□□□□□ -0.56
HCG20-207ENST00000422944 ASCC2Q9H1I8 757 aaPredicted RBP11.53□□□□□ -0.56
HCG20-207ENST00000422944 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 VAT1LQ9HCJ6 419 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
HCG20-207ENST00000422944 VWA5AO00534 786 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 SLC25A27O95847 323 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 ICAM1P05362 532 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 CALML3P27482 149 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 GJB2P29033 226 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 GNA11P29992 359 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 SLC16A2P36021 539 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 HERVK_113P62684 666 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 CCNA1P78396 465 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
HCG20-207ENST00000422944 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
HCG20-207ENST00000422944 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.57
HCG20-207ENST00000422944 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.57
HCG20-207ENST00000422944 TREML2Q5T2D2 321 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 FBXO11Q86XK2 927 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 PHKBQ93100 1093 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 ZFYVE28Q9HCC9 887 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 BRMS1Q9HCU9 246 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 FBXO40Q9UH90 709 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 MRPL11Q9Y3B7 192 aaKnown RBP11.52□□□□□ -0.57
HCG20-207ENST00000422944 ABCB11O95342 1321 aa11.52□□□□□ -0.57
HCG20-207ENST00000422944 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
HCG20-207ENST00000422944 SPDYE16A6NNV3 312 aaPredicted RBP11.51□□□□□ -0.57
HCG20-207ENST00000422944 CYTH3O43739 400 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 CTDNEP1O95476 244 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 QRICH1Q2TAL8 776 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 LARP1BQ659C4 914 aaKnown RBP11.51□□□□□ -0.57
HCG20-207ENST00000422944 HOMER1Q86YM7 354 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 MCF2L2Q86YR7 1114 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 PIGSQ96S52 555 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 P2RX7Q99572 595 aaKnown RBP11.51□□□□□ -0.57
HCG20-207ENST00000422944 ALG1Q9BT22 464 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 TEX13BQ9BXU2 312 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 FBXO28Q9NVF7 368 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 BARHL2Q9NY43 387 aa11.51□□□□□ -0.57
HCG20-207ENST00000422944 MAP3K20Q9NYL2 800 aaKnown RBP11.51□□□□□ -0.57
HCG20-207ENST00000422944 ESYT2A0FGR8 921 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 H3BQV1 296 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 STAT3P40763 770 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 MRPL12P52815 198 aaKnown RBP11.5□□□□□ -0.57
HCG20-207ENST00000422944 ST3GAL1Q11201 340 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 GRM1Q13255 1194 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 TAF1CQ15572 869 aaPredicted RBP11.5□□□□□ -0.57
HCG20-207ENST00000422944 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 HEATR3Q7Z4Q2 680 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
HCG20-207ENST00000422944 CHST13Q8NET6 341 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 DDX11Q96FC9 970 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 C8orf76Q96K31 380 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 C6orf50Q9HD87 102 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
HCG20-207ENST00000422944 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
HCG20-207ENST00000422944 CA12O43570 354 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 JAK2O60674 1132 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 FDPSP14324 419 aaKnown RBP11.49□□□□□ -0.57
HCG20-207ENST00000422944 VEGFBP49765 207 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 NAPAP54920 295 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 NUCB2P80303 420 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 MAP2K1Q02750 393 aaPredicted RBP11.49□□□□□ -0.57
HCG20-207ENST00000422944 DGKZQ13574 1117 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 PKN1Q16512 942 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
HCG20-207ENST00000422944 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 RIOX2Q8IUF8 465 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
HCG20-207ENST00000422944 FAM43AQ8N2R8 423 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 SHCBP1Q8NEM2 672 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 CUL5Q93034 780 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 PTPN18Q99952 460 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 CFHR5Q9BXR6 569 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 MORF4L1Q9UBU8 362 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 CCPG1Q9ULG6 757 aa11.49□□□□□ -0.57
HCG20-207ENST00000422944 IGF2BP3O00425 579 aaKnown RBP eCLIP11.48□□□□□ -0.57
HCG20-207ENST00000422944 TLR2O60603 784 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 NLRP5P59047 1200 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 SNRNP48Q6IEG0 339 aaKnown RBP11.48□□□□□ -0.57
HCG20-207ENST00000422944 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 FBXO18Q8NFZ0 1043 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 SPATC1LQ9H0A9 340 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 ZMYND12Q9H0C1 365 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
HCG20-207ENST00000422944 MROH8Q9H579 483 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms