RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 MTMR7Q9Y216 660 aa17.43■□□□□ 0.38
LINC01840-201ENST00000421870 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
LINC01840-201ENST00000421870 SEPT4O43236 478 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 CNGA1P29973 690 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 SLC16A2P36021 539 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 ZNF543Q08ER8 600 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 CCDC96Q2M329 555 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 MAMDC4Q6UXC1 1216 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 ENAHQ8N8S7 591 aaPredicted RBP17.42■□□□□ 0.38
LINC01840-201ENST00000421870 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 ALPK3Q96L96 1907 aa17.42■□□□□ 0.38
LINC01840-201ENST00000421870 COL6A1P12109 1028 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 SNAP25P60880 206 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
LINC01840-201ENST00000421870 SYDE2Q5VT97 1194 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 ANKRD35Q8N283 1001 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 PNMA1Q8ND90 353 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 C11orf49Q9H6J7 331 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 ACAD9Q9H845 621 aa17.41■□□□□ 0.38
LINC01840-201ENST00000421870 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
LINC01840-201ENST00000421870 ICAM1P05362 532 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 SEC23AQ15436 765 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 FGD4Q96M96 766 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 TNKSO95271 1327 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 SYNGAP1Q96PV0 1343 aa17.4■□□□□ 0.38
LINC01840-201ENST00000421870 MCM3APO60318 1980 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
LINC01840-201ENST00000421870 ZNF865P0CJ78 1059 aaPredicted RBP17.39■□□□□ 0.37
LINC01840-201ENST00000421870 ALAS1P13196 640 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 TRDNQ13061 729 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 CCDC174Q6PII3 467 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 CYB5R4Q7L1T6 521 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 FAM133AQ8N9E0 248 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 ESYT1Q9BSJ8 1104 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 A1CFQ9NQ94 594 aaKnown RBP17.39■□□□□ 0.37
LINC01840-201ENST00000421870 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 RNF146Q9NTX7 359 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 TAF6LQ9Y6J9 622 aa17.39■□□□□ 0.37
LINC01840-201ENST00000421870 E7EWF7 191 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 H0YGN5 161 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
LINC01840-201ENST00000421870 MUM1L1Q5H9M0 696 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 LSG1Q9H089 658 aaKnown RBP17.38■□□□□ 0.37
LINC01840-201ENST00000421870 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 CCPG1Q9ULG6 757 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
LINC01840-201ENST00000421870 NR2E3Q9Y5X4 410 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 PFASO15067 1338 aa17.38■□□□□ 0.37
LINC01840-201ENST00000421870 DNAH12Q6ZR08 3092 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 DNM1LO00429 736 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 EVI5O60447 810 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 NCOA7Q8NI08 942 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
LINC01840-201ENST00000421870 SOWAHBA6NEL2 793 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 POTEB2H3BUK9 544 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
LINC01840-201ENST00000421870 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 ABHD16BQ9H3Z7 469 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 CNPY2Q9Y2B0 182 aa17.36■□□□□ 0.37
LINC01840-201ENST00000421870 LCTP09848 1927 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 MYH6P13533 1939 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 CLEC4DQ8WXI8 215 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 KATNBL1Q9H079 304 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.35■□□□□ 0.37
LINC01840-201ENST00000421870 WDR19Q8NEZ3 1342 aa17.35■□□□□ 0.37
LINC01840-201ENST00000421870 RARBP10826 455 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 AKR1A1P14550 325 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 GJC2Q5T442 439 aaPredicted RBP17.34■□□□□ 0.37
LINC01840-201ENST00000421870 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
LINC01840-201ENST00000421870 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 ADGRF4Q8IZF3 695 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 IGDCC4Q8TDY8 1250 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 SENP6Q9GZR1 1112 aaPredicted RBP17.34■□□□□ 0.37
LINC01840-201ENST00000421870 MAF1Q9H063 256 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 CPVLQ9H3G5 476 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 FAM184BQ9ULE4 1060 aa17.34■□□□□ 0.37
LINC01840-201ENST00000421870 ASTN1O14525 1302 aa17.33■□□□□ 0.36
LINC01840-201ENST00000421870 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.36
LINC01840-201ENST00000421870 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.36
LINC01840-201ENST00000421870 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
LINC01840-201ENST00000421870 LRRC41Q15345 812 aa17.33■□□□□ 0.36
LINC01840-201ENST00000421870 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
LINC01840-201ENST00000421870 MB21D2Q8IYB1 491 aaPredicted RBP17.33■□□□□ 0.36
LINC01840-201ENST00000421870 RGS22Q8NE09 1264 aa17.33■□□□□ 0.36
LINC01840-201ENST00000421870 MTA3Q9BTC8 594 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms