RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 CCDC174Q6PII3 467 aa21.22■□□□□ 0.99
UBXN11-208ENST00000421827 MSL3Q8N5Y2 521 aaKnown RBP21.22■□□□□ 0.99
UBXN11-208ENST00000421827 ACAD9Q9H845 621 aa21.22■□□□□ 0.99
UBXN11-208ENST00000421827 GPCPD1Q9NPB8 672 aa21.22■□□□□ 0.99
UBXN11-208ENST00000421827 FRMPD2Q68DX3 1309 aaPredicted RBP21.22■□□□□ 0.99
UBXN11-208ENST00000421827 PLXNA1Q9UIW2 1896 aa21.22■□□□□ 0.99
UBXN11-208ENST00000421827 SNHG28P0DPA3 235 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 COL6A1P12109 1028 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 SLC16A2P36021 539 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 SYDE2Q5VT97 1194 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 ZSCAN10Q96SZ4 725 aaPredicted RBP21.21■□□□□ 0.99
UBXN11-208ENST00000421827 RNF146Q9NTX7 359 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 ZSWIM5Q9P217 1185 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 PFASO15067 1338 aa21.21■□□□□ 0.99
UBXN11-208ENST00000421827 ALAS1P13196 640 aa21.2■□□□□ 0.98
UBXN11-208ENST00000421827 ZNF543Q08ER8 600 aa21.2■□□□□ 0.98
UBXN11-208ENST00000421827 ZNF467Q7Z7K2 595 aaPredicted RBP21.2■□□□□ 0.98
UBXN11-208ENST00000421827 ANKS1AQ92625 1134 aa21.2■□□□□ 0.98
UBXN11-208ENST00000421827 TRERF1Q96PN7 1200 aa21.2■□□□□ 0.98
UBXN11-208ENST00000421827 RANBP17Q9H2T7 1088 aaKnown RBP21.2■□□□□ 0.98
UBXN11-208ENST00000421827 CNPY2Q9Y2B0 182 aa21.2■□□□□ 0.98
UBXN11-208ENST00000421827 U3KPZ7 1027 aaPredicted RBP21.2■□□□□ 0.98
UBXN11-208ENST00000421827 FRMPD3Q5JV73 1810 aa21.2■□□□□ 0.98
UBXN11-208ENST00000421827 ICAM1P05362 532 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
UBXN11-208ENST00000421827 ANO1Q5XXA6 986 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 MAMDC4Q6UXC1 1216 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 ENAHQ8N8S7 591 aaPredicted RBP21.19■□□□□ 0.98
UBXN11-208ENST00000421827 ARRDC4Q8NCT1 418 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 PNMA1Q8ND90 353 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 KAT14Q9H8E8 782 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 CCPG1Q9ULG6 757 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 SYNGAP1Q96PV0 1343 aa21.19■□□□□ 0.98
UBXN11-208ENST00000421827 GPATCH4Q5T3I0 446 aaKnown RBP21.18■□□□□ 0.98
UBXN11-208ENST00000421827 UBAC1Q9BSL1 405 aa21.18■□□□□ 0.98
UBXN11-208ENST00000421827 A1CFQ9NQ94 594 aaKnown RBP21.18■□□□□ 0.98
UBXN11-208ENST00000421827 TNKSO95271 1327 aa21.18■□□□□ 0.98
UBXN11-208ENST00000421827 DNM1LO00429 736 aa21.17■□□□□ 0.98
UBXN11-208ENST00000421827 SNAI1O95863 264 aaPredicted RBP21.17■□□□□ 0.98
UBXN11-208ENST00000421827 CYP21A2P08686 494 aa21.17■□□□□ 0.98
UBXN11-208ENST00000421827 ZNF865P0CJ78 1059 aaPredicted RBP21.17■□□□□ 0.98
UBXN11-208ENST00000421827 TRDNQ13061 729 aa21.17■□□□□ 0.98
UBXN11-208ENST00000421827 FGD4Q96M96 766 aa21.17■□□□□ 0.98
UBXN11-208ENST00000421827 ALPK3Q96L96 1907 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 POTEB2H3BUK9 544 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 RARBP10826 455 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 CNTN2Q02246 1040 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 MUM1L1Q5H9M0 696 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 GJC2Q5T442 439 aaPredicted RBP21.16■□□□□ 0.98
UBXN11-208ENST00000421827 SKAP1Q86WV1 359 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 C7orf61Q8IZ16 206 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 FAM133AQ8N9E0 248 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 MAP4K1Q92918 833 aa21.16■□□□□ 0.98
UBXN11-208ENST00000421827 SENP6Q9GZR1 1112 aaPredicted RBP21.16■□□□□ 0.98
UBXN11-208ENST00000421827 COLQQ9Y215 455 aaPredicted RBP21.16■□□□□ 0.98
UBXN11-208ENST00000421827 KBTBD13C9JR72 458 aa21.15■□□□□ 0.98
UBXN11-208ENST00000421827 GOLGA8HP0CJ92 632 aa21.15■□□□□ 0.98
UBXN11-208ENST00000421827 AKR1A1P14550 325 aa21.15■□□□□ 0.98
UBXN11-208ENST00000421827 HABP4Q5JVS0 413 aaKnown RBP21.15■□□□□ 0.98
UBXN11-208ENST00000421827 CYB5R4Q7L1T6 521 aa21.15■□□□□ 0.98
UBXN11-208ENST00000421827 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.15■□□□□ 0.98
UBXN11-208ENST00000421827 ZHX1Q9UKY1 873 aaPredicted RBP21.15■□□□□ 0.98
UBXN11-208ENST00000421827 PNMA2Q9UL42 364 aa21.15■□□□□ 0.98
UBXN11-208ENST00000421827 SMCHD1A6NHR9 2005 aa21.14■□□□□ 0.98
UBXN11-208ENST00000421827 LRRC41Q15345 812 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 BMP2KLQ5H9B9 411 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 IFIT1BQ5T764 474 aaKnown RBP21.14■□□□□ 0.97
UBXN11-208ENST00000421827 CHRDL2Q6WN34 429 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 NSMFQ6X4W1 530 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 KIAA1211Q6ZU35 1233 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 XPNPEP3Q9NQH7 507 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 CYP39A1Q9NYL5 469 aa21.14■□□□□ 0.97
UBXN11-208ENST00000421827 E7EWF7 191 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 MYCNP04198 464 aaPredicted RBP21.13■□□□□ 0.97
UBXN11-208ENST00000421827 ACVR2BQ13705 512 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 SEC23AQ15436 765 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 LRRC26Q2I0M4 334 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 ASPRV1Q53RT3 343 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 RALYLQ86SE5 291 aaKnown RBP21.13■□□□□ 0.97
UBXN11-208ENST00000421827 CCDC144CPQ8IYA2 1237 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 UBA5Q9GZZ9 404 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 ABHD16BQ9H3Z7 469 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 FAM184BQ9ULE4 1060 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 RBM8AQ9Y5S9 174 aaKnown RBP21.13■□□□□ 0.97
UBXN11-208ENST00000421827 TAF6LQ9Y6J9 622 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 DNAH12Q6ZR08 3092 aa21.13■□□□□ 0.97
UBXN11-208ENST00000421827 WDR19Q8NEZ3 1342 aa21.12■□□□□ 0.97
UBXN11-208ENST00000421827 SOWAHBA6NEL2 793 aa21.12■□□□□ 0.97
UBXN11-208ENST00000421827 ASB14A6NK59 587 aa21.12■□□□□ 0.97
UBXN11-208ENST00000421827 NCOA7Q8NI08 942 aa21.12■□□□□ 0.97
UBXN11-208ENST00000421827 CCDC136Q96JN2 1154 aa21.12■□□□□ 0.97
UBXN11-208ENST00000421827 ESYT1Q9BSJ8 1104 aa21.12■□□□□ 0.97
UBXN11-208ENST00000421827 NFIBO00712 420 aa21.11■□□□□ 0.97
UBXN11-208ENST00000421827 PGK1P00558 417 aa21.11■□□□□ 0.97
UBXN11-208ENST00000421827 PARP1P09874 1014 aaKnown RBP21.11■□□□□ 0.97
UBXN11-208ENST00000421827 STOX1Q6ZVD7 989 aa21.11■□□□□ 0.97
UBXN11-208ENST00000421827 RNF180Q86T96 592 aa21.11■□□□□ 0.97
UBXN11-208ENST00000421827 LENG1Q96BZ8 264 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms