RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 DBNLQ9UJU6 430 aaKnown RBP8.02□□□□□ -1.13
PMS1-208ENST00000421722 SYNPO2Q9UMS6 1093 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 TNKSO95271 1327 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 A0A0C4DFX4 3053 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 FAM86C2PA6NEL3 165 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 EEF2P13639 858 aaKnown RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 MYOGP15173 224 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 CCL23P55773 120 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 NHLH1Q02575 133 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 FSCN1Q16658 493 aaKnown RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 TKFCQ3LXA3 575 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 IQSEC1Q6DN90 963 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 SNRNP48Q6IEG0 339 aaKnown RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 AMOTL1Q8IY63 956 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
PMS1-208ENST00000421722 FBXO28Q9NVF7 368 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 POLR3EQ9NVU0 708 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 GNEQ9Y223 722 aaKnown RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 UMODL1Q5DID0 1318 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 ADCY6O43306 1168 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 B4GALT4O60513 344 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 CA3P07451 260 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 CDK8P49336 464 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 PTPN11Q06124 597 aaPredicted RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 FAM83BQ5T0W9 1011 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 C16orf86Q6ZW13 317 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 HERC6Q8IVU3 1022 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 FAM178BQ8IXR5 827 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 GJD3Q8N144 294 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 PRPF38AQ8NAV1 312 aaKnown RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 KHSRPQ92945 711 aaKnown RBP eCLIP8.01□□□□□ -1.138e-10■■□□□ 12.3
PMS1-208ENST00000421722 CTDP1Q9Y5B0 961 aaPredicted RBP8.01□□□□□ -1.13
PMS1-208ENST00000421722 ASTN1O14525 1302 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 GRIN2DO15399 1336 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 LAMA3Q16787 3333 aa8.01□□□□□ -1.13
PMS1-208ENST00000421722 EPOPA6NHQ4 379 aa8□□□□□ -1.13
PMS1-208ENST00000421722 RFXAPO00287 272 aa8□□□□□ -1.13
PMS1-208ENST00000421722 PDE6AP16499 860 aa8□□□□□ -1.13
PMS1-208ENST00000421722 COL4A4P53420 1690 aaPredicted RBP8□□□□□ -1.13
PMS1-208ENST00000421722 TTLL4Q14679 1199 aa8□□□□□ -1.13
PMS1-208ENST00000421722 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
PMS1-208ENST00000421722 C12orf60Q5U649 245 aa8□□□□□ -1.13
PMS1-208ENST00000421722 TRPV6Q9H1D0 765 aa8□□□□□ -1.13
PMS1-208ENST00000421722 ALDH8A1Q9H2A2 487 aaPredicted RBP8□□□□□ -1.13
PMS1-208ENST00000421722 NYAP2Q9P242 653 aa8□□□□□ -1.13
PMS1-208ENST00000421722 UNC80Q8N2C7 3258 aa8□□□□□ -1.13
PMS1-208ENST00000421722 GREB1LQ9C091 1923 aaPredicted RBP8□□□□□ -1.13
PMS1-208ENST00000421722 SPTBN5Q9NRC6 3674 aaKnown RBP8□□□□□ -1.13
PMS1-208ENST00000421722 LOC102724159A0A0B4J2E5 919 aa8□□□□□ -1.13
PMS1-208ENST00000421722 KPNA6O60684 536 aa8□□□□□ -1.13
PMS1-208ENST00000421722 LPXNO60711 386 aa8□□□□□ -1.13
PMS1-208ENST00000421722 CYP2D6P10635 497 aa8□□□□□ -1.13
PMS1-208ENST00000421722 RARSP54136 660 aaKnown RBP8□□□□□ -1.13
PMS1-208ENST00000421722 PWP2Q15269 919 aaKnown RBP8□□□□□ -1.13
PMS1-208ENST00000421722 CXCL17Q6UXB2 119 aa8□□□□□ -1.13
PMS1-208ENST00000421722 TLK2Q86UE8 772 aa8□□□□□ -1.13
PMS1-208ENST00000421722 ERC1Q8IUD2 1116 aa8□□□□□ -1.13
PMS1-208ENST00000421722 FAM9BQ8IZU0 186 aa8□□□□□ -1.13
PMS1-208ENST00000421722 ANKRD35Q8N283 1001 aa8□□□□□ -1.13
PMS1-208ENST00000421722 FAM133AQ8N9E0 248 aa8□□□□□ -1.13
PMS1-208ENST00000421722 RETREG2Q8NC44 543 aa8□□□□□ -1.13
PMS1-208ENST00000421722 ARNTL2Q8WYA1 636 aa8□□□□□ -1.13
PMS1-208ENST00000421722 UBE2ZQ9H832 354 aaPredicted RBP8□□□□□ -1.13
PMS1-208ENST00000421722 FEM1BQ9UK73 627 aa8□□□□□ -1.13
PMS1-208ENST00000421722 FAM50BQ9Y247 325 aa8□□□□□ -1.13
PMS1-208ENST00000421722 TCRBV5S4A2TA0A5A2 114 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 PITPNM1O00562 1244 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 SURF6O75683 361 aaKnown RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 IRX5P78411 483 aaPredicted RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 BEX3Q00994 111 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 SAMD1Q6SPF0 538 aaPredicted RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 DYNLL2Q96FJ2 89 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 SLC38A10Q9HBR0 1119 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 CD320Q9NPF0 282 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 PRKAG3Q9UGI9 489 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 RIPK3Q9Y572 518 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 DCXO43602 365 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 PARNO95453 639 aaKnown RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 ERVK-21P61565 698 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 FOXK2Q01167 660 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 BFSP2Q13515 415 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 LRRFIP1Q32MZ4 808 aaKnown RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 CCDC144CPQ8IYA2 1237 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 CCDC155Q8N6L0 562 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 MORC4Q8TE76 937 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 EAF2Q96CJ1 260 aaPredicted RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 MFSD14AQ96MC6 490 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 FBXL18Q96ME1 805 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 PRRX2Q99811 253 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 CCDC8Q9H0W5 538 aaPredicted RBP7.99□□□□□ -1.13
PMS1-208ENST00000421722 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 VTA1Q9NP79 307 aa7.99□□□□□ -1.13
PMS1-208ENST00000421722 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 ZBED9Q6R2W3 1325 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 ZNF532Q9HCE3 1301 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms