RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZHX1Q9UKY1 873 aaPredicted RBP20.56■□□□□ 0.88
MSH6-203ENST00000420813 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
MSH6-203ENST00000420813 ZNF536O15090 1300 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 MOXD2PA6NHM9 499 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 RANBP6O60518 1105 aaKnown RBP20.55■□□□□ 0.88
MSH6-203ENST00000420813 IKQ13123 557 aaPredicted RBP20.55■□□□□ 0.88
MSH6-203ENST00000420813 MCMDC2Q4G0Z9 681 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 KLHDC9Q8NEP7 349 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 MTMR10Q9NXD2 777 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 TACC3Q9Y6A5 838 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 LRRC37A2A6NM11 1700 aa20.55■□□□□ 0.88
MSH6-203ENST00000420813 ZMYM6O95789 1325 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 CST5P28325 142 aaPredicted RBP20.54■□□□□ 0.88
MSH6-203ENST00000420813 ACLYP53396 1101 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 FAM109BQ6ICB4 259 aaPredicted RBP20.54■□□□□ 0.88
MSH6-203ENST00000420813 Q7L0L9 218 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 ARMCX2Q7L311 632 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 FAM133AQ8N9E0 248 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 HOMER2Q9NSB8 354 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 RNF146Q9NTX7 359 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 LCTP09848 1927 aa20.54■□□□□ 0.88
MSH6-203ENST00000420813 A0A0D9SFI3 127 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 NMT2O60551 498 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 CLTBP09497 229 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 CCSAPQ6IQ19 270 aaPredicted RBP20.53■□□□□ 0.88
MSH6-203ENST00000420813 KCTD1Q719H9 257 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 SH3RF1Q7Z6J0 888 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 BADQ92934 168 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
MSH6-203ENST00000420813 FAM227BQ96M60 508 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 TOX2Q96NM4 488 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 A1CFQ9NQ94 594 aaKnown RBP20.53■□□□□ 0.88
MSH6-203ENST00000420813 STARD7Q9NQZ5 370 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 STXBP5LQ9Y2K9 1186 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 LAMA4Q16363 1823 aa20.53■□□□□ 0.88
MSH6-203ENST00000420813 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 FGAP02671 866 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 CCDC144BQ3MJ40 725 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 ANKRD33Q7Z3H0 272 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 SMC5Q8IY18 1101 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 CCDC144CPQ8IYA2 1237 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 PCSK9Q8NBP7 692 aaKnown RBP20.52■□□□□ 0.88
MSH6-203ENST00000420813 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 AGBL1Q96MI9 1066 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 LNPKQ9C0E8 428 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 KATNBL1Q9H079 304 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 UPF3AQ9H1J1 476 aaKnown RBP20.52■□□□□ 0.88
MSH6-203ENST00000420813 SPC25Q9HBM1 224 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 PRR12Q9ULL5 1215 aa20.52■□□□□ 0.88
MSH6-203ENST00000420813 KIAA0355O15063 1070 aa20.51■□□□□ 0.87
MSH6-203ENST00000420813 HSPD1P10809 573 aaKnown RBP20.51■□□□□ 0.87
MSH6-203ENST00000420813 GJA9P57773 515 aa20.51■□□□□ 0.87
MSH6-203ENST00000420813 KCNA10Q16322 511 aa20.51■□□□□ 0.87
MSH6-203ENST00000420813 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
MSH6-203ENST00000420813 TCP11L1Q9NUJ3 509 aa20.51■□□□□ 0.87
MSH6-203ENST00000420813 ELP1O95163 1332 aa20.51■□□□□ 0.87
MSH6-203ENST00000420813 ASB14A6NK59 587 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 ADCY6O43306 1168 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 PQBP1O60828 265 aaKnown RBP20.5■□□□□ 0.87
MSH6-203ENST00000420813 C6orf222P0C671 652 aaPredicted RBP20.5■□□□□ 0.87
MSH6-203ENST00000420813 PCP11498 1178 aaKnown RBP20.5■□□□□ 0.87
MSH6-203ENST00000420813 ALAS1P13196 640 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 NKX3-2P78367 333 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 CNTN2Q02246 1040 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 NMIQ13287 307 aaPredicted RBP20.5■□□□□ 0.87
MSH6-203ENST00000420813 SHHQ15465 462 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 SLC17A8Q8NDX2 589 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 CHMP4CQ96CF2 233 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 GLT1D1Q96MS3 346 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 RWDD1Q9H446 243 aaPredicted RBP20.5■□□□□ 0.87
MSH6-203ENST00000420813 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 CCDC171Q6TFL3 1326 aa20.5■□□□□ 0.87
MSH6-203ENST00000420813 MYADML2A6NDP7 307 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 TRIM6-TRIM34B2RNG4 842 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 TOP1P11387 765 aaKnown RBP20.49■□□□□ 0.87
MSH6-203ENST00000420813 C9orf50Q5SZB4 431 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 CCDC174Q6PII3 467 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 ZNF589Q86UQ0 364 aaPredicted RBP20.49■□□□□ 0.87
MSH6-203ENST00000420813 MROH7Q68CQ1 1323 aa20.49■□□□□ 0.87
MSH6-203ENST00000420813 SOWAHBA6NEL2 793 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 DCDC2CA8MYV0 355 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 ICAM1P05362 532 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 RAG1P15918 1043 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 MFAP1P55081 439 aaKnown RBP20.48■□□□□ 0.87
MSH6-203ENST00000420813 FAAP100Q0VG06 881 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 RRP12Q5JTH9 1297 aaKnown RBP20.48■□□□□ 0.87
MSH6-203ENST00000420813 TMEM47Q9BQJ4 181 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 RANBP17Q9H2T7 1088 aaKnown RBP20.48■□□□□ 0.87
MSH6-203ENST00000420813 OSBPL3Q9H4L5 887 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 TMEM39AQ9NV64 488 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 CYP39A1Q9NYL5 469 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 CCPG1Q9ULG6 757 aa20.48■□□□□ 0.87
MSH6-203ENST00000420813 ASGR1P07306 291 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms