RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 CALM1P0DP23 149 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 CALM2P0DP24 149 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 CALM3P0DP25 149 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 RPS6KB1P23443 525 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 GRK4P32298 578 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 SLC16A2P36021 539 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 SLC9C1Q4G0N8 1177 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 BLOC1S2Q6QNY1 142 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 NCAPG2Q86XI2 1143 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 RAVER2Q9HCJ3 691 aaKnown RBP16.83■□□□□ 0.28
PTPN18-204ENST00000420717 RIPK3Q9Y572 518 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 GTF3C3Q9Y5Q9 886 aa16.83■□□□□ 0.28
PTPN18-204ENST00000420717 DNAJC25-GNG10A0A024R161 153 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 ADCY3O60266 1144 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 FCER1AP12319 257 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 ADORA2AP29274 412 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 EVCP57679 992 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 MAP3K21Q5TCX8 1036 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 APOA5Q6Q788 366 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
PTPN18-204ENST00000420717 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 RIOX1Q9H6W3 641 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 JMJD4Q9H9V9 463 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
PTPN18-204ENST00000420717 DIS3Q9Y2L1 958 aaKnown RBP16.82■□□□□ 0.28
PTPN18-204ENST00000420717 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
PTPN18-204ENST00000420717 SMCHD1A6NHR9 2005 aa16.82■□□□□ 0.28
PTPN18-204ENST00000420717 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 KLRF2D3W0D1 207 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 HMGCRP04035 888 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 KIF5BP33176 963 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 OLFML2BQ68BL8 750 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 CPXCR1Q8N123 301 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 TRIB2Q92519 343 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 AGBL1Q96MI9 1066 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 LZTS2Q9BRK4 669 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 LRRC2Q9BYS8 371 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 ACAD9Q9H845 621 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
PTPN18-204ENST00000420717 LRRC37A2A6NM11 1700 aa16.81■□□□□ 0.28
PTPN18-204ENST00000420717 PFASO15067 1338 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 CYTH3O43739 400 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
PTPN18-204ENST00000420717 SEC24BO95487 1268 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 CASTP20810 708 aaKnown RBP16.8■□□□□ 0.28
PTPN18-204ENST00000420717 KCTD2Q14681 263 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 CDC37Q16543 378 aaPredicted RBP16.8■□□□□ 0.28
PTPN18-204ENST00000420717 CTCFLQ8NI51 663 aaPredicted RBP16.8■□□□□ 0.28
PTPN18-204ENST00000420717 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 MMP19Q99542 508 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 RNF146Q9NTX7 359 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 SLC12A7Q9Y666 1083 aa16.8■□□□□ 0.28
PTPN18-204ENST00000420717 GNAQP50148 359 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 GHRHRQ02643 423 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 ZNF792Q3KQV3 632 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 WDR78Q5VTH9 848 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 NFXL1Q6ZNB6 911 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
PTPN18-204ENST00000420717 MSL3Q8N5Y2 521 aaKnown RBP16.79■□□□□ 0.28
PTPN18-204ENST00000420717 SH3TC2Q8TF17 1288 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 UBA5Q9GZZ9 404 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 ALDH8A1Q9H2A2 487 aaPredicted RBP16.79■□□□□ 0.28
PTPN18-204ENST00000420717 CPVLQ9H3G5 476 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 BRPF3Q9ULD4 1205 aa16.79■□□□□ 0.28
PTPN18-204ENST00000420717 FRMPD3Q5JV73 1810 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 COBLO75128 1261 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 INHAP05111 366 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 CPA1P15085 419 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 ELNP15502 786 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 CYP2B6P20813 491 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 UBXN2AP68543 259 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 QRICH1Q2TAL8 776 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 CCDC174Q6PII3 467 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 TMTC3Q6ZXV5 915 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 FANCBQ8NB91 859 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 RGS22Q8NE09 1264 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 NPLOC4Q8TAT6 608 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 CLEC4DQ8WXI8 215 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 MAML3Q96JK9 1138 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 TRERF1Q96PN7 1200 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 MYL10Q9BUA6 226 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 A1CFQ9NQ94 594 aaKnown RBP16.78■□□□□ 0.28
PTPN18-204ENST00000420717 RBM28Q9NW13 759 aaKnown RBP16.78■□□□□ 0.28
PTPN18-204ENST00000420717 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
PTPN18-204ENST00000420717 BRCA2P51587 3418 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 ABCB11O95342 1321 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 ZBTB5O15062 677 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 CAPN2P17655 700 aa16.77■□□□□ 0.28
PTPN18-204ENST00000420717 SNAP25P60880 206 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms