RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SEPT2Q15019 361 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 NAALADL2Q58DX5 795 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 HHIPL2Q6UWX4 724 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 SPICE1Q8N0Z3 855 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 IQUBQ8NA54 791 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 JMJD4Q9H9V9 463 aa9.98□□□□□ -0.81
SNCA-206ENST00000420646 TCP10L2B9ZVM9 353 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 TEX33O43247 280 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 EDIL3O43854 480 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 TDP2O95551 362 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 EEF2P13639 858 aaKnown RBP9.97□□□□□ -0.81
SNCA-206ENST00000420646 TXKP42681 527 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 CCDC178Q5BJE1 867 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
SNCA-206ENST00000420646 C7orf43Q8WVR3 580 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 HPS3Q969F9 1004 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 ZDHHC15Q96MV8 337 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 SH3GLB2Q9NR46 395 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 STAT6P42226 847 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 TRAPPC10P48553 1259 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 ADKP55263 362 aaKnown RBP9.97□□□□□ -0.81
SNCA-206ENST00000420646 SOGA3Q5TF21 947 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 STRIP1Q5VSL9 837 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 CERS3Q8IU89 383 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
SNCA-206ENST00000420646 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 IGKV6D-41A0A0C4DH26 115 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L15C9J2P7 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L13C9JLJ4 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L11C9JVI0 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L18D6R9N7 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L22D6RA61 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L17D6RBQ6 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L19D6RCP7 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L20D6RJB6 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 SLC37A4O43826 429 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 HLA-DOAP06340 250 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 TNNT1P13805 278 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 TNNI2P48788 182 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L24Q0WX57 530 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 USP17L6PQ6QN14 398 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 SIAH1Q8IUQ4 282 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.81
SNCA-206ENST00000420646 MLKLQ8NB16 471 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 CPLX3Q8WVH0 158 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 C6orf50Q9HD87 102 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 CTNND2Q9UQB3 1225 aa9.96□□□□□ -0.81
SNCA-206ENST00000420646 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
SNCA-206ENST00000420646 SFPQP23246 707 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNCA-206ENST00000420646 UBA7P41226 1012 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 ZNF543Q08ER8 600 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.82
SNCA-206ENST00000420646 CERKLQ49MI3 558 aaPredicted RBP9.96□□□□□ -0.82
SNCA-206ENST00000420646 RRAGBQ5VZM2 374 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 TRIM49BA6NDI0 452 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 ZBTB7AO95365 584 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 BMP15O95972 392 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 ZNF18P17022 549 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 CCT6AP40227 531 aaKnown RBP9.96□□□□□ -0.82
SNCA-206ENST00000420646 NOVP48745 357 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 NONOQ15233 471 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNCA-206ENST00000420646 E4F1Q66K89 784 aaPredicted RBP9.96□□□□□ -0.82
SNCA-206ENST00000420646 STK32BQ9NY57 414 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 SUGT1Q9Y2Z0 365 aa9.96□□□□□ -0.82
SNCA-206ENST00000420646 CCDC84Q86UT8 332 aaPredicted RBP9.95□□□□□ -0.82
SNCA-206ENST00000420646 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 LZTS2Q9BRK4 669 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 DISC1Q9NRI5 854 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 ATF5Q9Y2D1 282 aaPredicted RBP9.95□□□□□ -0.82
SNCA-206ENST00000420646 SHTN1A0MZ66 631 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 POTEMA6NI47 508 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 NEMFO60524 1076 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 PLCG1P19174 1290 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 PMS1P54277 932 aaKnown RBP9.95□□□□□ -0.82
SNCA-206ENST00000420646 STYK1Q6J9G0 422 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 NEK8Q86SG6 692 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 ENOX1Q8TC92 643 aaKnown RBP9.95□□□□□ -0.82
SNCA-206ENST00000420646 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
SNCA-206ENST00000420646 GH2P01242 217 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 SNHG28P0DPA3 235 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 GNA11P29992 359 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 LONP1P36776 959 aaKnown RBP9.94□□□□□ -0.82
SNCA-206ENST00000420646 SLC1A4P43007 532 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 USH1GQ495M9 461 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 ARL6IP4Q66PJ3 421 aaKnown RBP9.94□□□□□ -0.82
SNCA-206ENST00000420646 MIGA2Q7L4E1 593 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 VSTM4Q8IW00 320 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 CNKSR1Q969H4 720 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 PI4KBQ9UBF8 816 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 SYNRGQ9UMZ2 1314 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 NRXN2Q9P2S2 1712 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 RPN1P04843 607 aaKnown RBP9.94□□□□□ -0.82
SNCA-206ENST00000420646 OR52Z1P0C646 297 aa9.94□□□□□ -0.82
SNCA-206ENST00000420646 DPEP1P16444 411 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms