RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 CSF1RP07333 972 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 GAP43P17677 238 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 AMNQ9BXJ7 453 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 SYNCQ9H7C4 482 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 XRCC5P13010 732 aaKnown RBP16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
AP000550.1-201ENST00000420508 FAM26FQ5R3K3 315 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 GPBP1Q86WP2 473 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 MRPL44Q9H9J2 332 aaKnown RBP16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 LRMPQ12912 555 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 DDIT3P35638 169 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 ADKP55263 362 aaKnown RBP16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 EIF6P56537 245 aaKnown RBP16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 DYMQ7RTS9 669 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 COA1Q9GZY4 146 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 APBA1Q02410 837 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 RPS6KA1Q15418 735 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 PARP2Q9UGN5 583 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
AP000550.1-201ENST00000420508 ORC4O43929 436 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 SNX16P57768 344 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 ICA1Q05084 483 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 B4GALNT4Q76KP1 1039 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 OTUD6AQ7L8S5 288 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 CCDC170Q8IYT3 715 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 MYCT1Q8N699 235 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 LARP4BQ92615 738 aaKnown RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 P2RX5Q93086 422 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 SPTLC3Q9NUV7 552 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 ARMCX3Q9UH62 379 aaPredicted RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 UTP11Q9Y3A2 253 aaKnown RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 hCG_1642624A0A1W2PR95 340 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 TECP42680 631 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 STRN3Q13033 797 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 HLFQ16534 295 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 SLFN13Q68D06 897 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 RNF14Q9UBS8 474 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 GAS7O60861 476 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 ATP2A2P16615 1042 aaKnown RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 BACH1O14867 736 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 MECOMQ03112 1051 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 TCHPQ9BT92 498 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 OSBPL5Q9H0X9 879 aaPredicted RBP16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 CDC23Q9UJX2 597 aa16.38■□□□□ 0.21
AP000550.1-201ENST00000420508 GCNT3O95395 438 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 SERPINB2P05120 415 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 SREK1Q8WXA9 508 aaKnown RBP16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 ZNF609O15014 1411 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 GBP1P32455 592 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 PLA2G4DQ86XP0 818 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 FAM81BQ96LP2 452 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 FEZ2Q9UHY8 353 aaPredicted RBP16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 EXOC3O60645 756 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 TBC1D10CQ8IV04 446 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
AP000550.1-201ENST00000420508 CCNE1P24864 410 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 KCNJ6P48051 423 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 MAN2A1Q16706 1144 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 GPKOWQ92917 476 aaPredicted RBP eCLIP16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 MKRN1Q9UHC7 482 aaKnown RBP16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 PRKAB2O43741 272 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 STAT1P42224 750 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 PFKFB3Q16875 520 aaPredicted RBP16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 DCAF15Q66K64 600 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 CHAMP1Q96JM3 812 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 PGBD1Q96JS3 809 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 MED4Q9NPJ6 270 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 C10orf76Q5T2E6 689 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 RAB17Q9H0T7 212 aa16.36■□□□□ 0.21
AP000550.1-201ENST00000420508 C2CD5Q86YS7 1000 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms