RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 TMEM240Q5SV17 173 aa5.07□□□□□ -1.6
CNGA1-203ENST00000420489 MFSD5Q6N075 450 aa5.07□□□□□ -1.6
CNGA1-203ENST00000420489 NKX2-4Q9H2Z4 354 aa5.07□□□□□ -1.6
CNGA1-203ENST00000420489 NRBP1Q9UHY1 535 aa5.07□□□□□ -1.6
CNGA1-203ENST00000420489 GABRQQ9UN88 632 aa5.07□□□□□ -1.6
CNGA1-203ENST00000420489 GNB5O14775 395 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 MSTNO14793 375 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 KHNYNO15037 678 aaKnown RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 TIMP1P01033 207 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 MAPTP10636 758 aaKnown RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 EPXP11678 715 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 AMPD1P23109 780 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 TNFAIP1Q13829 316 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 RHPN1Q8TCX5 695 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 GTF3C2Q8WUA4 911 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 LTV1Q96GA3 475 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 BTBD6Q96KE9 485 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 SAMD11Q96NU1 681 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 UBL7Q96S82 380 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 GGA1Q9UJY5 639 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 PRR12Q9ULL5 1215 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 UTYO14607 1347 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 CYSRT1A8MQ03 144 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 GCLCP48506 637 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 EPHA4P54764 986 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 ZNF528Q3MIS6 628 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 TIGD5Q53EQ6 642 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 PARP10Q53GL7 1025 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 NOL9Q5SY16 702 aaKnown RBP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 UNQ6494/PRO21346Q6UXR6 183 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 L3MBTL2Q969R5 705 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 SLC52A2Q9HAB3 445 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.06□□□□□ -1.6
CNGA1-203ENST00000420489 ZNF232Q9UNY5 417 aa5.06□□□□□ -1.6
CNGA1-203ENST00000420489 TNPO2O14787 897 aaKnown RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 PLA2G2AP14555 144 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 CTBSQ01459 385 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 SMAD4Q13485 552 aaKnown RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 GRAPQ13588 217 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 OLFM4Q6UX06 510 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 FASTKD5Q7L8L6 764 aaKnown RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 CCDC105Q8IYK2 499 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 TMEM199Q8N511 208 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 GRAPLQ8TC17 118 aaPredicted RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 SPATA18Q8TC71 538 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 PABPC5Q96DU9 382 aaKnown RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 RIPOR3Q96MK2 946 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 CSADQ9Y600 493 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 GBF1Q92538 1859 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 FSD2A1L4K1 749 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 EIF4E1BA6NMX2 242 aaKnown RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 FAM110CQ1W6H9 321 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 ZNF468Q5VIY5 522 aaPredicted RBP5.05□□□□□ -1.6
CNGA1-203ENST00000420489 OGFOD1Q8N543 542 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 TPCN2Q8NHX9 752 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 UBE2Q2Q8WVN8 375 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 RTP3Q9BQQ7 232 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 IL23AQ9NPF7 189 aa5.05□□□□□ -1.6
CNGA1-203ENST00000420489 TRIM43BA6NCK2 446 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 EFSO43281 561 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 SEC13P55735 322 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 TRIM43Q96BQ3 446 aaPredicted RBP5.04□□□□□ -1.6
CNGA1-203ENST00000420489 SLC9A7Q96T83 725 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 GJD2Q9UKL4 321 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 FANCMQ8IYD8 2048 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 SRRM3A6NNA2 597 aaPredicted RBP5.04□□□□□ -1.6
CNGA1-203ENST00000420489 WNT10BO00744 389 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 SIN3BO75182 1162 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 ICAM3P32942 547 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 RING1Q06587 406 aa5.04□□□□□ -1.6
CNGA1-203ENST00000420489 POM121CA8CG34 1229 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 C2CD2LO14523 706 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 STAU1O95793 577 aaKnown RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ZEB1P37275 1124 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 VCPP55072 806 aaKnown RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 GPAT2Q6NUI2 795 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 PDZD3Q86UT5 571 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ZDHHC1Q8WTX9 485 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 CLMNQ96JQ2 1002 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 CLMPQ9H6B4 373 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ABCC4O15439 1325 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ASTN2O75129 1339 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ADARB2-AS1A8MUL3 147 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 SHISA8B8ZZ34 492 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 J3QKU1 62 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 IGHA2P01877 340 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 USP6NLQ92738 828 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 GLMNQ92990 594 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 MORF4L1Q9UBU8 362 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 LOC285556D6RIA3 1793 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 SCN9AQ15858 1988 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 KBTBD13C9JR72 458 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 PDHXO00330 501 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 TBC1D4O60343 1298 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 IGSF3O75054 1194 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 IL9P15248 144 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 ATF7P17544 494 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-203ENST00000420489 STRIP1Q5VSL9 837 aa5.03□□□□□ -1.6
CNGA1-203ENST00000420489 LINC00114Q6XXX2 140 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms