RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 THEGQ9P2T0 379 aa12.27□□□□□ -0.45
TNFAIP3-202ENST00000420009 A0A0U1RQG5 324 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 ARVCFO00192 962 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 CTAGE5O15320 804 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 NDUFB10O96000 172 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 IFIT2P09913 472 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 C6orf222P0C671 652 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 GJA9P57773 515 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 NKX3-2P78367 333 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 CTR9Q6PD62 1173 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 TMEM199Q8N511 208 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 PCSK9Q8NBP7 692 aaKnown RBP12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 KATNBL1Q9H079 304 aa12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
TNFAIP3-202ENST00000420009 RAD21O60216 631 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 CD4P01730 458 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 ATP5JP18859 108 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 RAB30Q15771 203 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 CCDC129Q6ZRS4 1044 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 PRPF38AQ8NAV1 312 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 ADAMTS19Q8TE59 1207 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 HERVK_113Q902F9 699 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 HAUS7Q99871 368 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 ABHD16BQ9H3Z7 469 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 NYAP2Q9P242 653 aa12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 ARPP21Q9UBL0 812 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP3-202ENST00000420009 F5H6K3 240 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 ACRP10323 421 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 RASA1P20936 1047 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 KLRC3Q07444 240 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 GNASQ5JWF2 1037 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 PPM1EQ8WY54 764 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 PPP1R12CQ9BZL4 782 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 SPC25Q9HBM1 224 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 IL23AQ9NPF7 189 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 CXXC1Q9P0U4 656 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 RAPGEFL1Q9UHV5 662 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 REV3LO60673 3130 aa12.24□□□□□ -0.45
TNFAIP3-202ENST00000420009 ASTN1O14525 1302 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 IGKV6D-41A0A0C4DH26 115 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 APBB1O00213 710 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 TLR3O15455 904 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 CYP2C18P33260 490 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 MRPS5P82675 430 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 SIRT2Q8IXJ6 389 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 PANK1Q8TE04 598 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 UHRF1Q96T88 793 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 PUS7LQ9H0K6 701 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 FBXO40Q9UH90 709 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 MYH7P12883 1935 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 LRRC37A2A6NM11 1700 aa12.23□□□□□ -0.45
TNFAIP3-202ENST00000420009 MCM3APO60318 1980 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 ZBED4O75132 1171 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 OAZ1P54368 228 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 CCDC144CPQ8IYA2 1237 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 MTIF3Q9H2K0 278 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 NKX2-4Q9H2Z4 354 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 HIPK3Q9H422 1215 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 RAVER2Q9HCJ3 691 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 MSRAQ9UJ68 235 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 YBX2Q9Y2T7 364 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-202ENST00000420009 UMODL1Q5DID0 1318 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 HMMRO75330 724 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 PLA2G5P39877 138 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 GIMAP6Q6P9H5 292 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 CXCL17Q6UXB2 119 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 FAM133AQ8N9E0 248 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 SLC28A3Q9HAS3 691 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 FEM1BQ9UK73 627 aa12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.45
TNFAIP3-202ENST00000420009 GBF1Q92538 1859 aa12.21□□□□□ -0.46
TNFAIP3-202ENST00000420009 PLIN4Q96Q06 1357 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 GRIN2DO15399 1336 aa12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-202ENST00000420009 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms