RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 KRT2P35908 639 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 LBX1P52954 281 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 SPICE1Q8N0Z3 855 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 BICD2Q8TD16 824 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 SCAND2PQ9GZW5 306 aaPredicted RBP16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 GJB4Q9NTQ9 266 aa16.4■□□□□ 0.22
SHMT1P1-201ENST00000419974 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 HOXA7P31268 230 aaPredicted RBP16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 SLC16A2P36021 539 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 TRAPPC10P48553 1259 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 ZNF157P51786 506 aaPredicted RBP16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 KRT85P78386 507 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 CDC37Q16543 378 aaPredicted RBP16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 QRICH1Q2TAL8 776 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 AMNQ9BXJ7 453 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 C6orf50Q9HD87 102 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 FZD1Q9UP38 647 aa16.39■□□□□ 0.21
SHMT1P1-201ENST00000419974 hCG_1642624A0A1W2PR95 340 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 BTBD18B2RXH4 712 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 KIF28PB7ZC32 967 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 PPP1R11O60927 126 aaPredicted RBP16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 OAZ1P54368 228 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 NLRP5P59047 1200 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 GUCY1B3Q02153 619 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 RILPL1Q5EBL4 403 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 HEATR3Q7Z4Q2 680 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 POLR3EQ9NVU0 708 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 PPP1R9AQ9ULJ8 1098 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 KCNJ14Q9UNX9 436 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
SHMT1P1-201ENST00000419974 TRIM75PA6NK02 468 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 SLC10A3P09131 477 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 GHRHRQ02643 423 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 MCTP1Q6DN14 999 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 FBXO11Q86XK2 927 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 SLC38A10Q9HBR0 1119 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 HOXC10Q9NYD6 342 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 RCOR1Q9UKL0 485 aa16.37■□□□□ 0.21
SHMT1P1-201ENST00000419974 PIK3CDO00329 1044 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 IRF6O14896 467 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 RAD21O60216 631 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 YEATS4O95619 227 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 ICAM1P05362 532 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 CLK2P49760 499 aaKnown RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 MRPL12P52815 198 aaKnown RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 NAPAP54920 295 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 DNM1Q05193 864 aaKnown RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 PRKG1Q13976 671 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 TTLL12Q14166 644 aaPredicted RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 COG2Q14746 738 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 FASTKD5Q7L8L6 764 aaKnown RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 GPKOWQ92917 476 aaPredicted RBP eCLIP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 SLC45A1Q9Y2W3 748 aa16.36■□□□□ 0.21
SHMT1P1-201ENST00000419974 SMCO2A6NFE2 343 aa16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 HMGCS2P54868 508 aa16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 MOGSQ13724 837 aa16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 SLC10A4Q96EP9 437 aa16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 CLMNQ96JQ2 1002 aa16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 ZIC5Q96T25 663 aa16.35■□□□□ 0.21
SHMT1P1-201ENST00000419974 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms