RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SLAIN1Q8ND83 568 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 RAET1EQ8TD07 263 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 MTMR8Q96EF0 704 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 ZNF333Q96JL9 665 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 TCEANC2Q96MN5 208 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 APBA2Q99767 749 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 TM6SF1Q9BZW5 370 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 CPVLQ9H3G5 476 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 KIAA1217Q5T5P2 1943 aa21.78■■□□□ 1.08
PTCD3-204ENST00000418628 NID2Q14112 1375 aa21.77■■□□□ 1.08
PTCD3-204ENST00000418628 ADCY3O60266 1144 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 CPA1P15085 419 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 RPS6KB1P23443 525 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 ADORA2AP29274 412 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 GRK4P32298 578 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 RGS2P41220 211 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 ANAPC15P60006 121 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 TKFCQ3LXA3 575 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 BLOC1S2Q6QNY1 142 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 CATIPQ7Z7H3 387 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 CCAR1Q8IX12 1150 aaKnown RBP21.76■■□□□ 1.07
PTCD3-204ENST00000418628 CPXCR1Q8N123 301 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 CHST13Q8NET6 341 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 AGBL1Q96MI9 1066 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 ZSWIM6Q9HCJ5 1215 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 IVNS1ABPQ9Y6Y0 642 aa21.76■■□□□ 1.07
PTCD3-204ENST00000418628 KLRF2D3W0D1 207 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 PSMA5P28066 241 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 SNAP25P60880 206 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 APOA5Q6Q788 366 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 ADGRF4Q8IZF3 695 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 TRIB2Q92519 343 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 MYL10Q9BUA6 226 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 UBA5Q9GZZ9 404 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 RIOX1Q9H6W3 641 aa21.75■■□□□ 1.07
PTCD3-204ENST00000418628 DNAJC25-GNG10A0A024R161 153 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 CYTH3O43739 400 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 ELNP15502 786 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 CASTP20810 708 aaKnown RBP21.74■■□□□ 1.07
PTCD3-204ENST00000418628 RCAN1P53805 252 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 CDC37Q16543 378 aaPredicted RBP21.74■■□□□ 1.07
PTCD3-204ENST00000418628 WDR78Q5VTH9 848 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 CCDC174Q6PII3 467 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 NBPF11Q86T75 865 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 SH3TC2Q8TF17 1288 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 FBXO40Q9UH90 709 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
PTCD3-204ENST00000418628 CCDC69A6NI79 296 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 COBLO75128 1261 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 FCER1AP12319 257 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 TAL1P17542 331 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-204ENST00000418628 CYP2B6P20813 491 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 RUFY3Q7L099 469 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 NPLOC4Q8TAT6 608 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 MMP19Q99542 508 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 ACAD9Q9H845 621 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 RNF146Q9NTX7 359 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 PNMA2Q9UL42 364 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 CCPG1Q9ULG6 757 aa21.73■■□□□ 1.07
PTCD3-204ENST00000418628 CTDP1Q9Y5B0 961 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-204ENST00000418628 HMGCRP04035 888 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 CALM1P0DP23 149 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 CALM2P0DP24 149 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 CALM3P0DP25 149 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 SMARCA1P28370 1054 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 EVCP57679 992 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 CCL14Q16627 93 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 MAP3K21Q5TCX8 1036 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 TRMT44Q8IYL2 757 aaKnown RBP21.72■■□□□ 1.07
PTCD3-204ENST00000418628 SPZ1Q9BXG8 430 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 CWC22Q9HCG8 908 aaKnown RBP21.72■■□□□ 1.07
PTCD3-204ENST00000418628 FLRT1Q9NZU1 646 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 SLC12A7Q9Y666 1083 aa21.72■■□□□ 1.07
PTCD3-204ENST00000418628 KCTD2Q14681 263 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 QRICH1Q2TAL8 776 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 ZNF792Q3KQV3 632 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 MUM1L1Q5H9M0 696 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 OLFML2BQ68BL8 750 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 NFXL1Q6ZNB6 911 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 Q6ZUG5 572 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 CTCFLQ8NI51 663 aaPredicted RBP21.71■■□□□ 1.07
PTCD3-204ENST00000418628 NUP133Q8WUM0 1156 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 FGD4Q96M96 766 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 TRERF1Q96PN7 1200 aa21.71■■□□□ 1.07
PTCD3-204ENST00000418628 A1CFQ9NQ94 594 aaKnown RBP21.71■■□□□ 1.07
PTCD3-204ENST00000418628 DIS3Q9Y2L1 958 aaKnown RBP21.71■■□□□ 1.07
PTCD3-204ENST00000418628 INHAP05111 366 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 ALAS1P13196 640 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 RXRAP19793 462 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 KIF5BP33176 963 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 TOB2Q14106 344 aaPredicted RBP21.7■■□□□ 1.06
PTCD3-204ENST00000418628 MICU3Q86XE3 530 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 CLEC4DQ8WXI8 215 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 HOMER2Q9NSB8 354 aa21.7■■□□□ 1.06
PTCD3-204ENST00000418628 PPP1R11O60927 126 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-204ENST00000418628 PLEKHA8P1O95397 391 aa21.69■■□□□ 1.06
PTCD3-204ENST00000418628 TRIM32Q13049 653 aa21.69■■□□□ 1.06
PTCD3-204ENST00000418628 TMTC3Q6ZXV5 915 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms