RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 RIC8AQ9NPQ8 531 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 RTN4Q9NQC3 1192 aaKnown RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 PIM2Q9P1W9 311 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 SMCHD1A6NHR9 2005 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 FRMPD2Q68DX3 1309 aaPredicted RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 DOCK1Q14185 1865 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 BIN1O00499 593 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 MPHOSPH10O00566 681 aaKnown RBP10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 ZBTB5O15062 677 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 TBC1D12O60347 775 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 SMC2O95347 1197 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 ADCY7P51828 1080 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 EIF6P56537 245 aaKnown RBP10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 TPM4P67936 248 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 MAP3K10Q02779 954 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 ICA1Q05084 483 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 SEPT2Q15019 361 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 ABCB5Q2M3G0 1257 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 BTNL9Q6UXG8 535 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 NEK8Q86SG6 692 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 NIM1KQ8IY84 436 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 IQUBQ8NA54 791 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 PAGE5Q96GU1 130 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 SGIP1Q9BQI5 828 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 TRIM34Q9BYJ4 488 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 MAGEF1Q9HAY2 307 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 PGAP2Q9UHJ9 254 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
LINCMD1-201ENST00000418518 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 EDIL3O43854 480 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 NEMFO60524 1076 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 RAD17O75943 681 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 MYL1P05976 194 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 OR52Z1P0C646 297 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 SLURP2P0DP57 97 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 POLD1P28340 1107 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 ERCC5P28715 1186 aaPredicted RBP10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 TXLNAP40222 546 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 PLCB2Q00722 1185 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 DLGAP5Q15398 846 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 CCDC96Q2M329 555 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 DALRD3Q5D0E6 543 aaKnown RBP10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 SLFN13Q68D06 897 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 DTHD1Q6ZMT9 781 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 ZSCAN29Q8IWY8 852 aaPredicted RBP10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 PDILTQ8N807 584 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 ENOX1Q8TC92 643 aaKnown RBP10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 DHX58Q96C10 678 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 CSRNP1Q96S65 589 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 CUEDC2Q9H467 287 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 DISC1Q9NRI5 854 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 SPTLC3Q9NUV7 552 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 SBF1O95248 1867 aa10.27□□□□□ -0.77
LINCMD1-201ENST00000418518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 NFKBIEO00221 500 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 OFD1O75665 1012 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 ZNF18P17022 549 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 RPS12P25398 132 aaKnown RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 ZNF280AP59817 542 aaPredicted RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 JAG1P78504 1218 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 CXCL9Q07325 125 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 CUL4BQ13620 913 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 DHX8Q14562 1220 aaKnown RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 RRP1BQ14684 758 aaKnown RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 NAALADL2Q58DX5 795 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 RBM26Q5T8P6 1007 aaKnown RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 MCTP2Q6DN12 878 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 PPP4R3AQ6IN85 833 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 GRAMD1CQ8IYS0 662 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 IGSF22Q8N9C0 903 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 TBCKQ8TEA7 893 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 CUL5Q93034 780 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 COA7Q96BR5 231 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 MTMR9Q96QG7 549 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 TTC12Q9H892 705 aaPredicted RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 VAT1LQ9HCJ6 419 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 IMPACTQ9P2X3 320 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 ATF5Q9Y2D1 282 aaPredicted RBP10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 CD2APQ9Y5K6 639 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
LINCMD1-201ENST00000418518 LOXHD1Q8IVV2 1947 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 F5H6K3 240 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 PLA2G6O60733 806 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 GDF11O95390 407 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 NDUFB10O96000 172 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 GH2P01242 217 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 GCFC2P16383 781 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms