RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GINM1Q9NU53 330 aa19.1■□□□□ 0.65
SSBP3-205ENST00000417664 VWA3AA6NCI4 1184 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 ADCY5O95622 1261 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 NDUFB10O96000 172 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
SSBP3-205ENST00000417664 TRAF1Q13077 416 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 RRP1BQ14684 758 aaKnown RBP19.09■□□□□ 0.65
SSBP3-205ENST00000417664 SHROOM1Q2M3G4 852 aaPredicted RBP19.09■□□□□ 0.65
SSBP3-205ENST00000417664 MCTP2Q6DN12 878 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 SYMPKQ92797 1274 aaKnown RBP19.09■□□□□ 0.65
SSBP3-205ENST00000417664 CUL5Q93034 780 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 TMEM39BQ9GZU3 492 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 ZBTB21Q9ULJ3 1066 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 TMX2Q9Y320 296 aa19.09■□□□□ 0.65
SSBP3-205ENST00000417664 PSDA5PKW4 1024 aaPredicted RBP19.08■□□□□ 0.65
SSBP3-205ENST00000417664 BECN2A8MW95 431 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 USP17L10C9JJH3 530 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 ACTN4O43707 911 aaKnown RBP19.08■□□□□ 0.65
SSBP3-205ENST00000417664 SLFN14P0C7P3 912 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 BMP3P12645 472 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 TXLNAP40222 546 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 POSTNQ15063 836 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 DTHD1Q6ZMT9 781 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 C11orf57Q6ZUT1 292 aaPredicted RBP19.08■□□□□ 0.65
SSBP3-205ENST00000417664 COA7Q96BR5 231 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 GOPCQ9HD26 462 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 CCDC39Q9UFE4 941 aa19.08■□□□□ 0.65
SSBP3-205ENST00000417664 SLC16A2P36021 539 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 CAP2P40123 477 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 JAG1P78504 1218 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 TRIML1Q8N9V2 468 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 EPSTI1Q96J88 318 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 SERTAD1Q9UHV2 236 aa19.08■□□□□ 0.64
SSBP3-205ENST00000417664 RAD21O60216 631 aa19.07■□□□□ 0.64
SSBP3-205ENST00000417664 ASNSP08243 561 aa19.07■□□□□ 0.64
SSBP3-205ENST00000417664 GMPSP49915 693 aaPredicted RBP19.07■□□□□ 0.64
SSBP3-205ENST00000417664 RASSF7Q02833 373 aa19.07■□□□□ 0.64
SSBP3-205ENST00000417664 IQUBQ8NA54 791 aa19.07■□□□□ 0.64
SSBP3-205ENST00000417664 TBCKQ8TEA7 893 aa19.07■□□□□ 0.64
SSBP3-205ENST00000417664 AK8Q96MA6 479 aa19.07■□□□□ 0.64
SSBP3-205ENST00000417664 NAP1L4Q99733 375 aaKnown RBP19.07■□□□□ 0.64
SSBP3-205ENST00000417664 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 CLK2P49760 499 aaKnown RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 PNOCQ13519 176 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 RASA3Q14644 834 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 CDC37Q16543 378 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 QRICH1Q2TAL8 776 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 SYDE2Q5VT97 1194 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 SARM1Q6SZW1 724 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 USP49Q70CQ1 688 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 MICALL2Q8IY33 904 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 ERCC4Q92889 916 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 PSTPIP2Q9H939 334 aa19.06■□□□□ 0.64
SSBP3-205ENST00000417664 BIN2Q9UBW5 565 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 CNOT7Q9UIV1 285 aaKnown RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
SSBP3-205ENST00000417664 A0A1W2PRG0 241 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 SMTNL1A8MU46 457 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 NEMFO60524 1076 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 PLA2G6O60733 806 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 SMC2O95347 1197 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 LETM2Q2VYF4 491 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 DPCR1Q3MIW9 517 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 JAKMIP3Q5VZ66 844 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 FAM43AQ8N2R8 423 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 NLGN2Q8NFZ4 835 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 SPATA20Q8TB22 786 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 AMNQ9BXJ7 453 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 PCDHA5Q9Y5H7 936 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 CCNT1O60563 726 aaKnown RBP19.05■□□□□ 0.64
SSBP3-205ENST00000417664 OR52Z1P0C646 297 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 SARSP49591 514 aaKnown RBP19.05■□□□□ 0.64
SSBP3-205ENST00000417664 PLCB2Q00722 1185 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 IL17AQ16552 155 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 SH3RF1Q7Z6J0 888 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 DHX40Q8IX18 779 aaKnown RBP19.05■□□□□ 0.64
SSBP3-205ENST00000417664 PDILTQ8N807 584 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 SMARCE1Q969G3 411 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 PCDHA1Q9Y5I3 950 aa19.05■□□□□ 0.64
SSBP3-205ENST00000417664 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 IKBKBO14920 756 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 TPM4P67936 248 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 CT47A1Q5JQC4 288 aaPredicted RBP19.04■□□□□ 0.64
SSBP3-205ENST00000417664 PPP4R3AQ6IN85 833 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 DHX58Q96C10 678 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 HOOK2Q96ED9 719 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 CCSER1Q9C0I3 900 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 DACH1Q9UI36 760 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 GJA3Q9Y6H8 435 aa19.04■□□□□ 0.64
SSBP3-205ENST00000417664 H7C1D1 291 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 GCFC2P16383 781 aaKnown RBP19.03■□□□□ 0.64
SSBP3-205ENST00000417664 PRELPP51888 382 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 STAT2P52630 851 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 IKQ13123 557 aaPredicted RBP19.03■□□□□ 0.64
SSBP3-205ENST00000417664 AP3B2Q13367 1082 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 MIGA2Q7L4E1 593 aa19.03■□□□□ 0.64
SSBP3-205ENST00000417664 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.03■□□□□ 0.64
SSBP3-205ENST00000417664 FBXO11Q86XK2 927 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms