RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 TDHQ8IZJ6 230 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 DCAF4Q8WV16 495 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 TTC14Q96N46 770 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 LBHD1Q9BQE6 289 aaPredicted RBP21.76■■□□□ 1.07
VPS16-204ENST00000417508 TSEN34Q9BSV6 310 aaKnown RBP21.76■■□□□ 1.07
VPS16-204ENST00000417508 ACAD9Q9H845 621 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 TOMM22Q9NS69 142 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 PHF24Q9UPV7 400 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 HIP1O00291 1037 aa21.75■■□□□ 1.07
VPS16-204ENST00000417508 TOP1P11387 765 aaKnown RBP21.75■■□□□ 1.07
VPS16-204ENST00000417508 MFSD6Q6ZSS7 791 aa21.75■■□□□ 1.07
VPS16-204ENST00000417508 ZNF589Q86UQ0 364 aaPredicted RBP21.75■■□□□ 1.07
VPS16-204ENST00000417508 ABHD16BQ9H3Z7 469 aa21.75■■□□□ 1.07
VPS16-204ENST00000417508 RNF41Q9H4P4 317 aaPredicted RBP21.75■■□□□ 1.07
VPS16-204ENST00000417508 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
VPS16-204ENST00000417508 KCTD1Q719H9 257 aa21.74■■□□□ 1.07
VPS16-204ENST00000417508 ATP11BQ9Y2G3 1177 aa21.74■■□□□ 1.07
VPS16-204ENST00000417508 ZNF536O15090 1300 aa21.74■■□□□ 1.07
VPS16-204ENST00000417508 PGK1P00558 417 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 ACVR2BQ13705 512 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
VPS16-204ENST00000417508 BTNL9Q6UXG8 535 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 AGBL1Q96MI9 1066 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 TRERF1Q96PN7 1200 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 RNF146Q9NTX7 359 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.73■■□□□ 1.07
VPS16-204ENST00000417508 PRR12Q9ULL5 1215 aa21.73■■□□□ 1.07
VPS16-204ENST00000417508 POTEB2H3BUK9 544 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 DUSP11O75319 330 aaKnown RBP21.72■■□□□ 1.07
VPS16-204ENST00000417508 MDM2Q00987 491 aaPredicted RBP21.72■■□□□ 1.07
VPS16-204ENST00000417508 FAM133AQ8N9E0 248 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 FERMT2Q96AC1 680 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 TMEM47Q9BQJ4 181 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 HOMER2Q9NSB8 354 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 DIAPH3Q9NSV4 1193 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 PNMA2Q9UL42 364 aa21.72■■□□□ 1.07
VPS16-204ENST00000417508 ASB14A6NK59 587 aa21.71■■□□□ 1.07
VPS16-204ENST00000417508 SOX1O00570 391 aaPredicted RBP21.71■■□□□ 1.07
VPS16-204ENST00000417508 ADAMTS4O75173 837 aa21.71■■□□□ 1.07
VPS16-204ENST00000417508 NUP133Q8WUM0 1156 aa21.71■■□□□ 1.07
VPS16-204ENST00000417508 SPC25Q9HBM1 224 aa21.71■■□□□ 1.07
VPS16-204ENST00000417508 A1CFQ9NQ94 594 aaKnown RBP21.71■■□□□ 1.07
VPS16-204ENST00000417508 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
VPS16-204ENST00000417508 MCM3APO60318 1980 aa21.7■■□□□ 1.07
VPS16-204ENST00000417508 MOXD2PA6NHM9 499 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 ZNF213O14771 459 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 ALAS1P13196 640 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 HAND2P61296 217 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 CCDC96Q2M329 555 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 TRIM60Q495X7 471 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 CCDC178Q5BJE1 867 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 ARMCX2Q7L311 632 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 KLHDC9Q8NEP7 349 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 ESR2Q92731 530 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 CHMP4CQ96CF2 233 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 FGD4Q96M96 766 aa21.7■■□□□ 1.06
VPS16-204ENST00000417508 SUPT16HQ9Y5B9 1047 aaKnown RBP21.7■■□□□ 1.06
VPS16-204ENST00000417508 ICAM1P05362 532 aa21.69■■□□□ 1.06
VPS16-204ENST00000417508 CST5P28325 142 aaPredicted RBP21.69■■□□□ 1.06
VPS16-204ENST00000417508 CCDC174Q6PII3 467 aa21.69■■□□□ 1.06
VPS16-204ENST00000417508 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
VPS16-204ENST00000417508 CCDC144CPQ8IYA2 1237 aa21.69■■□□□ 1.06
VPS16-204ENST00000417508 PCSK9Q8NBP7 692 aaKnown RBP21.69■■□□□ 1.06
VPS16-204ENST00000417508 LRCH3Q96II8 777 aa21.69■■□□□ 1.06
VPS16-204ENST00000417508 RANBP17Q9H2T7 1088 aaKnown RBP21.69■■□□□ 1.06
VPS16-204ENST00000417508 MTMR7Q9Y216 660 aa21.69■■□□□ 1.06
VPS16-204ENST00000417508 A0A1W2PQ45 241 aaPredicted RBP21.68■■□□□ 1.06
VPS16-204ENST00000417508 A0A1W2PQY0 241 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 ACLYP53396 1101 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 CNTN2Q02246 1040 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 TLE2Q04725 743 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 CCDC144BQ3MJ40 725 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 SYDE2Q5VT97 1194 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 DGKHQ86XP1 1220 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 TOX2Q96NM4 488 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 CTNNA3Q9UI47 895 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 CCPG1Q9ULG6 757 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 SYNRGQ9UMZ2 1314 aa21.68■■□□□ 1.06
VPS16-204ENST00000417508 GJA9P57773 515 aa21.67■■□□□ 1.06
VPS16-204ENST00000417508 KCNA10Q16322 511 aa21.67■■□□□ 1.06
VPS16-204ENST00000417508 CCSAPQ6IQ19 270 aaPredicted RBP21.67■■□□□ 1.06
VPS16-204ENST00000417508 UPF3AQ9H1J1 476 aaKnown RBP21.67■■□□□ 1.06
VPS16-204ENST00000417508 CYP39A1Q9NYL5 469 aa21.67■■□□□ 1.06
VPS16-204ENST00000417508 DNAH12Q6ZR08 3092 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 ELP1O95163 1332 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 LOC102724159A0A0B4J2E5 919 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 SOWAHBA6NEL2 793 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 PDHBP11177 359 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 NKX3-2P78367 333 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 PWP2Q15269 919 aaKnown RBP21.66■■□□□ 1.06
VPS16-204ENST00000417508 TTBK2Q6IQ55 1244 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 IQCA1Q86XH1 822 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 TBC1D10CQ8IV04 446 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 KATNBL1Q9H079 304 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 PRDM5Q9NQX1 630 aaPredicted RBP21.66■■□□□ 1.06
VPS16-204ENST00000417508 STARD7Q9NQZ5 370 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 PDLIM7Q9NR12 457 aa21.66■■□□□ 1.06
VPS16-204ENST00000417508 SNHG28P0DPA3 235 aa21.65■■□□□ 1.06
VPS16-204ENST00000417508 SLC16A2P36021 539 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms