RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 BRAPQ7Z569 592 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
GABRE-202ENST00000417300 TMEM87AQ8NBN3 555 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 WNK4Q96J92 1243 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 SNX27Q96L92 541 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 GUCD1Q96NT3 240 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 ZNF341Q9BYN7 854 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 ARHGEF10LQ9HCE6 1279 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 MTMR7Q9Y216 660 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 EYSQ5T1H1 3165 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 SSC5DA1L4H1 1573 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 PRUNE2Q8WUY3 3088 aa13.69□□□□□ -0.22
GABRE-202ENST00000417300 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
GABRE-202ENST00000417300 MMP1P03956 469 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 GJB1P08034 283 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 GOLGA8HP0CJ92 632 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 KRT85P78386 507 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
GABRE-202ENST00000417300 NBR1Q14596 966 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 SLFN13Q68D06 897 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 TDHQ8IZJ6 230 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 GMCL1Q96IK5 515 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 CHAMP1Q96JM3 812 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 SH2D4AQ9H788 454 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 TMX2Q9Y320 296 aa13.68□□□□□ -0.22
GABRE-202ENST00000417300 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 F5H6K3 240 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 hCG_1984214I3L0E3 225 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 U2AF2P26368 475 aaKnown RBP eCLIP13.67□□□□□ -0.226e-7■■■■■ 31.6
GABRE-202ENST00000417300 KLRC3Q07444 240 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 KIF22Q14807 665 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 SAFBQ15424 915 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■□□□□ 11.3
GABRE-202ENST00000417300 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 ZNF713Q8N859 430 aaPredicted RBP13.67□□□□□ -0.22
GABRE-202ENST00000417300 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 SH3GLB2Q9NR46 395 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
GABRE-202ENST00000417300 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
GABRE-202ENST00000417300 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 NDUFB10O96000 172 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 SLC1A4P43007 532 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 FOXD4L6Q3SYB3 417 aaPredicted RBP13.66□□□□□ -0.22
GABRE-202ENST00000417300 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 FOXD4L3Q6VB84 417 aaPredicted RBP13.66□□□□□ -0.22
GABRE-202ENST00000417300 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
GABRE-202ENST00000417300 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
GABRE-202ENST00000417300 VPS54Q9P1Q0 977 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
GABRE-202ENST00000417300 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 CCL5P13501 91 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 PRMT2P55345 433 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 NOL9Q5SY16 702 aaKnown RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 FAM109BQ6ICB4 259 aaPredicted RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 DIS3L2Q8IYB7 885 aaKnown RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 CCDC148Q8NFR7 591 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 MTMR8Q96EF0 704 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 ZNF396Q96N95 335 aaPredicted RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 PTPN18Q99952 460 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 SCAND2PQ9GZW5 306 aaPredicted RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 UBA5Q9GZZ9 404 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 VCPKMTQ9H867 229 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 ZFYVE28Q9HCC9 887 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 GOPCQ9HD26 462 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 GPCPD1Q9NPB8 672 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 SEC63Q9UGP8 760 aaKnown RBP13.65□□□□□ -0.22
GABRE-202ENST00000417300 KCNJ14Q9UNX9 436 aa13.65□□□□□ -0.22
GABRE-202ENST00000417300 ELP1O95163 1332 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 PHIPQ8WWQ0 1821 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 OTOFQ9HC10 1997 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 FIBPO43427 364 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 GNRH1P01148 92 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 BMP3P12645 472 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 NCLP19338 710 aaKnown RBP13.64□□□□□ -0.23
GABRE-202ENST00000417300 CALML3P27482 149 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 INPP5BP32019 993 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 KRT2P35908 639 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
GABRE-202ENST00000417300 NPY5RQ15761 445 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 WWC2Q6AWC2 1192 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 GALNT17Q6IS24 598 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 CPVLQ9H3G5 476 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 BRMS1Q9HCU9 246 aa13.64□□□□□ -0.23
GABRE-202ENST00000417300 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms