RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ACAD9Q9H845 621 aa29.91■■■□□ 2.38
VEGFA-208ENST00000417285 PHF24Q9UPV7 400 aa29.91■■■□□ 2.38
VEGFA-208ENST00000417285 ATP11BQ9Y2G3 1177 aa29.91■■■□□ 2.38
VEGFA-208ENST00000417285 FRMPD3Q5JV73 1810 aa29.9■■■□□ 2.38
VEGFA-208ENST00000417285 SNX17Q15036 470 aa29.9■■■□□ 2.38
VEGFA-208ENST00000417285 KCTD1Q719H9 257 aa29.9■■■□□ 2.38
VEGFA-208ENST00000417285 ZNF589Q86UQ0 364 aaPredicted RBP29.9■■■□□ 2.38
VEGFA-208ENST00000417285 DCAF4Q8WV16 495 aa29.9■■■□□ 2.38
VEGFA-208ENST00000417285 RRP12Q5JTH9 1297 aaKnown RBP29.89■■■□□ 2.38
VEGFA-208ENST00000417285 GPR153Q6NV75 609 aa29.89■■■□□ 2.38
VEGFA-208ENST00000417285 MFSD6Q6ZSS7 791 aa29.89■■■□□ 2.38
VEGFA-208ENST00000417285 TSEN34Q9BSV6 310 aaKnown RBP29.89■■■□□ 2.38
VEGFA-208ENST00000417285 ABHD16BQ9H3Z7 469 aa29.89■■■□□ 2.38
VEGFA-208ENST00000417285 HIP1O00291 1037 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 SOX1O00570 391 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-208ENST00000417285 PGK1P00558 417 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 TOP1P11387 765 aaKnown RBP29.88■■■□□ 2.37
VEGFA-208ENST00000417285 MDM2Q00987 491 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-208ENST00000417285 ACVR2BQ13705 512 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 FERMT2Q96AC1 680 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 AGBL1Q96MI9 1066 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 TTC14Q96N46 770 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 RNF41Q9H4P4 317 aaPredicted RBP29.88■■■□□ 2.37
VEGFA-208ENST00000417285 HOMER2Q9NSB8 354 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 PRR12Q9ULL5 1215 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 ZNF536O15090 1300 aa29.88■■■□□ 2.37
VEGFA-208ENST00000417285 POTEB2H3BUK9 544 aa29.87■■■□□ 2.37
VEGFA-208ENST00000417285 NT5C2P49902 561 aa29.87■■■□□ 2.37
VEGFA-208ENST00000417285 AKNAD1Q5T1N1 836 aa29.87■■■□□ 2.37
VEGFA-208ENST00000417285 CHMP4CQ96CF2 233 aa29.87■■■□□ 2.37
VEGFA-208ENST00000417285 RNF146Q9NTX7 359 aa29.87■■■□□ 2.37
VEGFA-208ENST00000417285 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-208ENST00000417285 ZHX1Q9UKY1 873 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-208ENST00000417285 SMCHD1A6NHR9 2005 aa29.86■■■□□ 2.37
VEGFA-208ENST00000417285 DUSP11O75319 330 aaKnown RBP29.86■■■□□ 2.37
VEGFA-208ENST00000417285 TRERF1Q96PN7 1200 aa29.86■■■□□ 2.37
VEGFA-208ENST00000417285 LAMA3Q16787 3333 aa29.86■■■□□ 2.37
VEGFA-208ENST00000417285 CCDC96Q2M329 555 aa29.85■■■□□ 2.37
VEGFA-208ENST00000417285 BTNL9Q6UXG8 535 aa29.85■■■□□ 2.37
VEGFA-208ENST00000417285 FAM133AQ8N9E0 248 aa29.85■■■□□ 2.37
VEGFA-208ENST00000417285 LRCH3Q96II8 777 aa29.85■■■□□ 2.37
VEGFA-208ENST00000417285 TMEM47Q9BQJ4 181 aa29.85■■■□□ 2.37
VEGFA-208ENST00000417285 DIAPH3Q9NSV4 1193 aa29.85■■■□□ 2.37
VEGFA-208ENST00000417285 ADAMTS4O75173 837 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 ALAS1P13196 640 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 HAND2P61296 217 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 TRIM60Q495X7 471 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 ARMCX2Q7L311 632 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 FGD4Q96M96 766 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 A1CFQ9NQ94 594 aaKnown RBP29.84■■■□□ 2.37
VEGFA-208ENST00000417285 MTMR7Q9Y216 660 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 PLXNA1Q9UIW2 1896 aa29.84■■■□□ 2.37
VEGFA-208ENST00000417285 ASB14A6NK59 587 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 ZNF213O14771 459 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 CCDC174Q6PII3 467 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 CWC27Q6UX04 472 aaKnown RBP29.83■■■□□ 2.37
VEGFA-208ENST00000417285 CCDC144CPQ8IYA2 1237 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 NUP133Q8WUM0 1156 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 SPC25Q9HBM1 224 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 PNMA2Q9UL42 364 aa29.83■■■□□ 2.37
VEGFA-208ENST00000417285 MOXD2PA6NHM9 499 aa29.82■■■□□ 2.36
VEGFA-208ENST00000417285 IRX6P78412 446 aaPredicted RBP29.82■■■□□ 2.36
VEGFA-208ENST00000417285 CNTN2Q02246 1040 aa29.82■■■□□ 2.36
VEGFA-208ENST00000417285 TLE2Q04725 743 aa29.82■■■□□ 2.36
VEGFA-208ENST00000417285 CCDC144BQ3MJ40 725 aa29.82■■■□□ 2.36
VEGFA-208ENST00000417285 KLHDC9Q8NEP7 349 aa29.82■■■□□ 2.36
VEGFA-208ENST00000417285 ESR2Q92731 530 aa29.82■■■□□ 2.36
VEGFA-208ENST00000417285 A0A1W2PQ45 241 aaPredicted RBP29.81■■■□□ 2.36
VEGFA-208ENST00000417285 A0A1W2PQY0 241 aa29.81■■■□□ 2.36
VEGFA-208ENST00000417285 ICAM1P05362 532 aa29.81■■■□□ 2.36
VEGFA-208ENST00000417285 ACLYP53396 1101 aa29.81■■■□□ 2.36
VEGFA-208ENST00000417285 CCDC178Q5BJE1 867 aa29.81■■■□□ 2.36
VEGFA-208ENST00000417285 RANBP17Q9H2T7 1088 aaKnown RBP29.81■■■□□ 2.36
VEGFA-208ENST00000417285 CCPG1Q9ULG6 757 aa29.81■■■□□ 2.36
VEGFA-208ENST00000417285 SYNRGQ9UMZ2 1314 aa29.8■■■□□ 2.36
VEGFA-208ENST00000417285 SNAP25P60880 206 aa29.8■■■□□ 2.36
VEGFA-208ENST00000417285 SYDE2Q5VT97 1194 aa29.8■■■□□ 2.36
VEGFA-208ENST00000417285 PCSK9Q8NBP7 692 aaKnown RBP29.8■■■□□ 2.36
VEGFA-208ENST00000417285 LENG1Q96BZ8 264 aaPredicted RBP29.8■■■□□ 2.36
VEGFA-208ENST00000417285 PRDM5Q9NQX1 630 aaPredicted RBP29.8■■■□□ 2.36
VEGFA-208ENST00000417285 CST5P28325 142 aaPredicted RBP29.79■■■□□ 2.36
VEGFA-208ENST00000417285 KCNA10Q16322 511 aa29.79■■■□□ 2.36
VEGFA-208ENST00000417285 TTBK2Q6IQ55 1244 aa29.79■■■□□ 2.36
VEGFA-208ENST00000417285 SOWAHBA6NEL2 793 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 SLC16A2P36021 539 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 GJA9P57773 515 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 CCSAPQ6IQ19 270 aaPredicted RBP29.78■■■□□ 2.36
VEGFA-208ENST00000417285 RASGRP2Q7LDG7 609 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 DGKHQ86XP1 1220 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 TBC1D10CQ8IV04 446 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 TOX2Q96NM4 488 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 DSCC1Q9BVC3 393 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 GPCPD1Q9NPB8 672 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 PDLIM7Q9NR12 457 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 CYP39A1Q9NYL5 469 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 CTNNA3Q9UI47 895 aa29.78■■■□□ 2.36
VEGFA-208ENST00000417285 PDHBP11177 359 aa29.77■■■□□ 2.36
VEGFA-208ENST00000417285 MUM1L1Q5H9M0 696 aa29.77■■■□□ 2.36
VEGFA-208ENST00000417285 KATNBL1Q9H079 304 aa29.77■■■□□ 2.36
VEGFA-208ENST00000417285 UPF3AQ9H1J1 476 aaKnown RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms