RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 VEZTQ9HBM0 779 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 CABP5Q9NP86 173 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 SH3GLB2Q9NR46 395 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 GJB4Q9NTQ9 266 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 DDX19AQ9NUU7 478 aaKnown RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 POLR3EQ9NVU0 708 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 VPS54Q9P1Q0 977 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 TMEM63CQ9P1W3 806 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 CLIP2Q9UDT6 1046 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 MAD2L2Q9UI95 211 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 HERC5Q9UII4 1024 aaKnown RBP7.63□□□□□ -1.19
HDAC8-211ENST00000415409 KCNJ14Q9UNX9 436 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 MTMR7Q9Y216 660 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 SLX4Q8IY92 1834 aa7.63□□□□□ -1.19
HDAC8-211ENST00000415409 SBF1O95248 1867 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 ATRNL1Q5VV63 1379 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 hCG_1642624A0A1W2PR95 340 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 BTBD18B2RXH4 712 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 UBE2Q2LH0YL09 131 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 SPTLC2O15270 562 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 NASPP49321 788 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 MRE11P49959 708 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 ZNF280AP59817 542 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 ATP2B2Q01814 1243 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 RASSF7Q02833 373 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 ABCB5Q2M3G0 1257 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 RILPL1Q5EBL4 403 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 GALNT17Q6IS24 598 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 TATDN1Q6P1N9 297 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 LIAT1Q6ZQX7 453 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 CCDC73Q6ZRK6 1079 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 TMEM179Q6ZVK1 233 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 SH3BP5LQ7L8J4 393 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 FAM83AQ86UY5 434 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 STAG2Q8N3U4 1231 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 LINC00301Q8NCQ3 95 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 CCDC148Q8NFR7 591 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 NLGN2Q8NFZ4 835 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 CCDC12Q8WUD4 166 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 PIBF1Q8WXW3 757 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 DPF2Q92785 391 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 RRP36Q96EU6 259 aaKnown RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 ZBED3Q96IU2 234 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 SPSB2Q99619 263 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 PHF20Q9BVI0 1012 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 SPZ1Q9BXG8 430 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 MYOZ2Q9NPC6 264 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 NYAP2Q9P242 653 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 SEC63Q9UGP8 760 aaKnown RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 NOL7Q9UMY1 257 aaKnown RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 CEP131Q9UPN4 1083 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 CCDC88AQ3V6T2 1871 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 COL2A1P02458 1487 aaPredicted RBP7.62□□□□□ -1.19
HDAC8-211ENST00000415409 LAMA4Q16363 1823 aa7.62□□□□□ -1.19
HDAC8-211ENST00000415409 A0A1W2PQ27 194 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 A0A1W2PQ64 194 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 A0A1W2PQD8 194 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 SYCE3A1L190 88 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 FSD2A1L4K1 749 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 FAM187AA6NFU0 413 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 USP17L5A8MUK1 530 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 FZD9O00144 591 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 TNFRSF10AO00220 468 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 GOLGA8HP0CJ92 632 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 FECHP22830 423 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 GMPSP49915 693 aaPredicted RBP7.61□□□□□ -1.19
HDAC8-211ENST00000415409 ICA1Q05084 483 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 TNFAIP1Q13829 316 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 SLC39A14Q15043 492 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 GPATCH4Q5T3I0 446 aaKnown RBP7.61□□□□□ -1.19
HDAC8-211ENST00000415409 ADALQ6DHV7 355 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 LRSAM1Q6UWE0 723 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 TRIM67Q6ZTA4 783 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 ARHGAP27Q6ZUM4 889 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 CCAR1Q8IX12 1150 aaKnown RBP7.61□□□□□ -1.19
HDAC8-211ENST00000415409 LRRC47Q8N1G4 583 aaKnown RBP7.61□□□□□ -1.19
HDAC8-211ENST00000415409 MKL1Q969V6 931 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 PGBD1Q96JS3 809 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 FTOQ9C0B1 505 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC8-211ENST00000415409 DNAJC18Q9H819 358 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 SYNPO2Q9UMS6 1093 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 CLIC4Q9Y696 253 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 KIAA1551Q9HCM1 1747 aa7.61□□□□□ -1.19
HDAC8-211ENST00000415409 TRIM75PA6NK02 468 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 FAM196BA6NMK8 535 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 H7C1D1 291 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 hCG_1984214I3L0E3 225 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 WNT10BO00744 389 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 CTAGE5O15320 804 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 PPP6R2O75170 966 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 BMP15O95972 392 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 SNHG28P0DPA3 235 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 PDHBP11177 359 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 EEF2P13639 858 aaKnown RBP7.6□□□□□ -1.19
HDAC8-211ENST00000415409 LIG1P18858 919 aa7.6□□□□□ -1.19
HDAC8-211ENST00000415409 LMNB1P20700 586 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms