RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 REPS2Q8NFH8 660 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 ANKS1AQ92625 1134 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 SEZ6LQ9BYH1 1024 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 PPP1R9AQ9ULJ8 1098 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 USP34Q70CQ2 3546 aa19.16■□□□□ 0.66
CPNE1-208ENST00000414711 CFAP54Q96N23 3096 aa19.15■□□□□ 0.66
CPNE1-208ENST00000414711 POTEB3A0JP26 581 aa19.15■□□□□ 0.66
CPNE1-208ENST00000414711 IDH1O75874 414 aaKnown RBP19.15■□□□□ 0.66
CPNE1-208ENST00000414711 EVX2Q03828 476 aa19.15■□□□□ 0.66
CPNE1-208ENST00000414711 MTX1Q13505 466 aa19.15■□□□□ 0.66
CPNE1-208ENST00000414711 POTEBQ6S5H4 581 aa19.15■□□□□ 0.66
CPNE1-208ENST00000414711 SIAH1Q8IUQ4 282 aa19.15■□□□□ 0.66
CPNE1-208ENST00000414711 MCM3APO60318 1980 aa19.14■□□□□ 0.65
CPNE1-208ENST00000414711 ARMCX2Q7L311 632 aa19.14■□□□□ 0.65
CPNE1-208ENST00000414711 MAGEB6Q8N7X4 407 aa19.14■□□□□ 0.65
CPNE1-208ENST00000414711 DBNDD2Q9BQY9 259 aa19.14■□□□□ 0.65
CPNE1-208ENST00000414711 TEX13BQ9BXU2 312 aa19.14■□□□□ 0.65
CPNE1-208ENST00000414711 ASTN1O14525 1302 aa19.14■□□□□ 0.65
CPNE1-208ENST00000414711 FSCN1Q16658 493 aaKnown RBP19.13■□□□□ 0.65
CPNE1-208ENST00000414711 SNRNP48Q6IEG0 339 aaKnown RBP19.13■□□□□ 0.65
CPNE1-208ENST00000414711 NOL8Q76FK4 1167 aaKnown RBP19.13■□□□□ 0.65
CPNE1-208ENST00000414711 TLK2Q86UE8 772 aa19.13■□□□□ 0.65
CPNE1-208ENST00000414711 FGD4Q96M96 766 aa19.13■□□□□ 0.65
CPNE1-208ENST00000414711 MFSD14AQ96MC6 490 aa19.13■□□□□ 0.65
CPNE1-208ENST00000414711 SCN5AQ14524 2016 aa19.12■□□□□ 0.65
CPNE1-208ENST00000414711 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-208ENST00000414711 GRXCR2A6NFK2 248 aa19.12■□□□□ 0.65
CPNE1-208ENST00000414711 PSMC6P62333 389 aa19.12■□□□□ 0.65
CPNE1-208ENST00000414711 KATNBL1Q9H079 304 aa19.12■□□□□ 0.65
CPNE1-208ENST00000414711 ALDH8A1Q9H2A2 487 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-208ENST00000414711 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
CPNE1-208ENST00000414711 TNFAIP2Q03169 654 aa19.11■□□□□ 0.65
CPNE1-208ENST00000414711 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.655e-8■□□□□ 9.2
CPNE1-208ENST00000414711 PUS10Q3MIT2 529 aaKnown RBP19.11■□□□□ 0.65
CPNE1-208ENST00000414711 PRSS33Q8NF86 280 aa19.11■□□□□ 0.65
CPNE1-208ENST00000414711 ZNF512BQ96KM6 892 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-208ENST00000414711 MCM9Q9NXL9 1143 aa19.11■□□□□ 0.65
CPNE1-208ENST00000414711 RIPK3Q9Y572 518 aa19.11■□□□□ 0.65
CPNE1-208ENST00000414711 LCHNA4D1U4 455 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 ZEB2O60315 1214 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 CYP2C9P11712 490 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 AKR1B1P15121 316 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 RFC2P35250 354 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 PTPN5P54829 565 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 TNNI3KQ59H18 835 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 FAM83BQ5T0W9 1011 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 CCDC144CPQ8IYA2 1237 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 RIOK1Q9BRS2 568 aaKnown RBP19.1■□□□□ 0.65
CPNE1-208ENST00000414711 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 TRMT13Q9NUP7 481 aaKnown RBP19.1■□□□□ 0.65
CPNE1-208ENST00000414711 GNEQ9Y223 722 aaKnown RBP19.1■□□□□ 0.65
CPNE1-208ENST00000414711 FPGT-TNNI3KV9GXZ4 949 aa19.1■□□□□ 0.65
CPNE1-208ENST00000414711 SUPT20HL2P0C7V6 817 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 ALDH1L2Q3SY69 923 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 AP5M1Q9H0R1 490 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 GOPCQ9HD26 462 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 SWAP70Q9UH65 585 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 MTUS1Q9ULD2 1270 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 TANC1Q9C0D5 1861 aa19.09■□□□□ 0.65
CPNE1-208ENST00000414711 MYH8P13535 1937 aa19.08■□□□□ 0.65
CPNE1-208ENST00000414711 TNKSO95271 1327 aa19.08■□□□□ 0.65
CPNE1-208ENST00000414711 RAD21O60216 631 aa19.08■□□□□ 0.64
CPNE1-208ENST00000414711 SLC4A3P48751 1232 aa19.08■□□□□ 0.64
CPNE1-208ENST00000414711 ZP2Q05996 745 aa19.08■□□□□ 0.64
CPNE1-208ENST00000414711 SLF1Q9BQI6 1058 aa19.08■□□□□ 0.64
CPNE1-208ENST00000414711 FTOQ9C0B1 505 aaKnown RBP eCLIP19.08■□□□□ 0.645e-10■□□□□ 9.7
CPNE1-208ENST00000414711 SUGCTQ9HAC7 445 aa19.08■□□□□ 0.64
CPNE1-208ENST00000414711 GPR108Q9NPR9 543 aa19.08■□□□□ 0.64
CPNE1-208ENST00000414711 GFRA3O60609 400 aa19.07■□□□□ 0.64
CPNE1-208ENST00000414711 BAIAP3O94812 1187 aa19.07■□□□□ 0.64
CPNE1-208ENST00000414711 GNAI3P08754 354 aa19.07■□□□□ 0.64
CPNE1-208ENST00000414711 CYP2D6P10635 497 aa19.07■□□□□ 0.64
CPNE1-208ENST00000414711 EEF2P13639 858 aaKnown RBP19.07■□□□□ 0.64
CPNE1-208ENST00000414711 PTGS1P23219 599 aa19.07■□□□□ 0.64
CPNE1-208ENST00000414711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.07■□□□□ 0.643e-8■□□□□ 9.3
CPNE1-208ENST00000414711 ANKRD35Q8N283 1001 aa19.07■□□□□ 0.64
CPNE1-208ENST00000414711 SPTBN4Q9H254 2564 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 MAGEB6P1A0A0J9YX57 407 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 H3BQ06 376 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-208ENST00000414711 KCNJ6P48051 423 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-208ENST00000414711 NEK9Q8TD19 979 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 DYNLL2Q96FJ2 89 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 CRNKL1Q9BZJ0 848 aaKnown RBP19.06■□□□□ 0.64
CPNE1-208ENST00000414711 PRKAG3Q9UGI9 489 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 PTPRSQ13332 1948 aa19.06■□□□□ 0.64
CPNE1-208ENST00000414711 DYNC1LI2O43237 492 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-208ENST00000414711 CPXCR1Q8N123 301 aa19.05■□□□□ 0.64
CPNE1-208ENST00000414711 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
CPNE1-208ENST00000414711 FAM50BQ9Y247 325 aa19.05■□□□□ 0.64
CPNE1-208ENST00000414711 PNMA6EA0A0J9YXQ4 647 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 C19orf67A6NJJ6 358 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 IQCF3P0C7M6 154 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 SMPD1P17405 629 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 ERVK-21P61565 698 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 DIEXFQ68CQ4 756 aaKnown RBP19.04■□□□□ 0.64
CPNE1-208ENST00000414711 TMCO2Q7Z6W1 182 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-208ENST00000414711 CCDC17Q96LX7 622 aa19.04■□□□□ 0.64
CPNE1-208ENST00000414711 TGS1Q96RS0 853 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms