RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CHURC1Q8WUH1 139 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 FGD4Q96M96 766 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 LBHD1Q9BQE6 289 aaPredicted RBP18.38■□□□□ 0.53
ACTB-202ENST00000414620 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 PRKAG2Q9UGJ0 569 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 FBXO40Q9UH90 709 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 ZNF536O15090 1300 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 SYNGAP1Q96PV0 1343 aa18.38■□□□□ 0.53
ACTB-202ENST00000414620 ALAS1P13196 640 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 NUCB1Q02818 461 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 RNF180Q86T96 592 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
ACTB-202ENST00000414620 ACAD9Q9H845 621 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.37■□□□□ 0.53
ACTB-202ENST00000414620 PRR12Q9ULL5 1215 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 PHF24Q9UPV7 400 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 SYNRGQ9UMZ2 1314 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 SZT2Q5T011 3432 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 MYH6P13533 1939 aa18.37■□□□□ 0.53
ACTB-202ENST00000414620 FDX1P10109 184 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 SDSP20132 328 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 SNX17Q15036 470 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
ACTB-202ENST00000414620 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 RCSD1Q6JBY9 416 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 MAMDC4Q6UXC1 1216 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.36■□□□□ 0.536e-19■■□□□ 12.8
ACTB-202ENST00000414620 ARMCX2Q7L311 632 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 FAM184BQ9ULE4 1060 aa18.36■□□□□ 0.53
ACTB-202ENST00000414620 ZMYM6O95789 1325 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 A0A1W2PQ45 241 aaPredicted RBP18.35■□□□□ 0.53
ACTB-202ENST00000414620 A0A1W2PQY0 241 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 MYADML2A6NDP7 307 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 ADCY6O43306 1168 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 ADAMTS4O75173 837 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 FGRP09769 529 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 SLC16A2P36021 539 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 IRX5P78411 483 aaPredicted RBP18.35■□□□□ 0.53
ACTB-202ENST00000414620 ACVR2BQ13705 512 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 SH3RF1Q7Z6J0 888 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 ZNF467Q7Z7K2 595 aaPredicted RBP18.35■□□□□ 0.53
ACTB-202ENST00000414620 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
ACTB-202ENST00000414620 A1CFQ9NQ94 594 aaKnown RBP18.35■□□□□ 0.53
ACTB-202ENST00000414620 DNAH12Q6ZR08 3092 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 NOVP48745 357 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 MUM1L1Q5H9M0 696 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
ACTB-202ENST00000414620 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 GPCPD1Q9NPB8 672 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 PDLIM7Q9NR12 457 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
ACTB-202ENST00000414620 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
ACTB-202ENST00000414620 NEDD4P46934 1319 aa18.33■□□□□ 0.53
ACTB-202ENST00000414620 PLA2G6O60733 806 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
ACTB-202ENST00000414620 TLE2Q04725 743 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 Q7L0L9 218 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 OSBPL3Q9H4L5 887 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
ACTB-202ENST00000414620 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
ACTB-202ENST00000414620 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
ACTB-202ENST00000414620 PQBP1O60828 265 aaKnown RBP18.32■□□□□ 0.52
ACTB-202ENST00000414620 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
ACTB-202ENST00000414620 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
ACTB-202ENST00000414620 TICAM2Q86XR7 235 aa18.32■□□□□ 0.52
ACTB-202ENST00000414620 BADQ92934 168 aa18.32■□□□□ 0.52
ACTB-202ENST00000414620 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
ACTB-202ENST00000414620 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
ACTB-202ENST00000414620 TRIM43BA6NCK2 446 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
ACTB-202ENST00000414620 C6orf222P0C671 652 aaPredicted RBP18.31■□□□□ 0.52
ACTB-202ENST00000414620 ACLYP53396 1101 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
ACTB-202ENST00000414620 KCNA10Q16322 511 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 NSMFQ6X4W1 530 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 KLHDC9Q8NEP7 349 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 TRIM43Q96BQ3 446 aaPredicted RBP18.31■□□□□ 0.52
ACTB-202ENST00000414620 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
ACTB-202ENST00000414620 KATNBL1Q9H079 304 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
ACTB-202ENST00000414620 STARD7Q9NQZ5 370 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 TCP11L1Q9NUJ3 509 aa18.31■□□□□ 0.52
ACTB-202ENST00000414620 ASTN1O14525 1302 aa18.3■□□□□ 0.52
ACTB-202ENST00000414620 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.3■□□□□ 0.52
ACTB-202ENST00000414620 CLTBP09497 229 aa18.3■□□□□ 0.52
ACTB-202ENST00000414620 PDHBP11177 359 aa18.3■□□□□ 0.52
ACTB-202ENST00000414620 C1orf53Q5VUE5 145 aa18.3■□□□□ 0.52
ACTB-202ENST00000414620 TSEN34Q9BSV6 310 aaKnown RBP18.3■□□□□ 0.52
ACTB-202ENST00000414620 ZNF213O14771 459 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms