RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 PAK6Q9NQU5 681 aaPredicted RBP11.8□□□□□ -0.52
TMEM248-202ENST00000413593 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
TMEM248-202ENST00000413593 FBXO40Q9UH90 709 aa11.8□□□□□ -0.52
TMEM248-202ENST00000413593 PLXNB2O15031 1838 aa11.8□□□□□ -0.52
TMEM248-202ENST00000413593 RPTORQ8N122 1335 aa11.8□□□□□ -0.52
TMEM248-202ENST00000413593 ERICH2A1L162 156 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 PGK2P07205 417 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 GJA8P48165 433 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 CACNB2Q08289 660 aaPredicted RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 COL9A3Q14050 684 aaPredicted RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 SART3Q15020 963 aaKnown RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 MFSD14CQ5VZR4 134 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 OLFML2BQ68BL8 750 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 DEFB118Q96PH6 123 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 HMX1Q9NP08 348 aaPredicted RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 KIAA0100Q14667 2235 aaKnown RBP11.79□□□□□ -0.52
TMEM248-202ENST00000413593 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 ZNF236Q9UL36 1845 aa11.79□□□□□ -0.52
TMEM248-202ENST00000413593 PRC1O43663 620 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 SGPL1O95470 568 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 ICAM1P05362 532 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
TMEM248-202ENST00000413593 CYP2C19P33261 490 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 WTAPQ15007 396 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 IGDCC4Q8TDY8 1250 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 MAML3Q96JK9 1138 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 MTA3Q9BTC8 594 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 ACAD9Q9H845 621 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 RNF146Q9NTX7 359 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 CCPG1Q9ULG6 757 aa11.78□□□□□ -0.52
TMEM248-202ENST00000413593 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
TMEM248-202ENST00000413593 DNAJC25-GNG10A0A024R161 153 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 ALAS1P13196 640 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 TAL1P17542 331 aaPredicted RBP11.77□□□□□ -0.53
TMEM248-202ENST00000413593 CCND3P30281 292 aaPredicted RBP11.77□□□□□ -0.53
TMEM248-202ENST00000413593 MCM5P33992 734 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 ANKRD35Q8N283 1001 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 DDX11Q96FC9 970 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 TRERF1Q96PN7 1200 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 CRISPLD2Q9H0B8 497 aa11.77□□□□□ -0.53
TMEM248-202ENST00000413593 GPHNQ9NQX3 736 aaPredicted RBP11.77□□□□□ -0.53
TMEM248-202ENST00000413593 SH2B2O14492 632 aaPredicted RBP11.76□□□□□ -0.53
TMEM248-202ENST00000413593 REC8O95072 547 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 CYBAP13498 195 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 CAPN2P17655 700 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 TROAPQ12815 778 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 GRM4Q14833 912 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 MUM1L1Q5H9M0 696 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 ADGRF4Q8IZF3 695 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 TRPV1Q8NER1 839 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 KCNB2Q92953 911 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
TMEM248-202ENST00000413593 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 WDR19Q8NEZ3 1342 aa11.76□□□□□ -0.53
TMEM248-202ENST00000413593 RBBP6Q7Z6E9 1792 aaKnown RBP11.76□□□□□ -0.53
TMEM248-202ENST00000413593 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
TMEM248-202ENST00000413593 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
TMEM248-202ENST00000413593 KLRF2D3W0D1 207 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 HSPA4P34932 840 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 KRT32Q14532 448 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
TMEM248-202ENST00000413593 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 CATIPQ7Z7H3 387 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 FGD4Q96M96 766 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 TINF2Q9BSI4 451 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 CENPFP49454 3210 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 PFASO15067 1338 aa11.75□□□□□ -0.53
TMEM248-202ENST00000413593 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 NFIBO00712 420 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 EPB41L2O43491 1005 aaKnown RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 DHX16O60231 1041 aaKnown RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 DDAH1O94760 285 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 FARP2O94887 1054 aaPredicted RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 LIFRP42702 1097 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 EXOSC10Q01780 885 aaKnown RBP11.74□□□□□ -0.53
TMEM248-202ENST00000413593 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 SLC35G1Q2M3R5 365 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 QRICH1Q2TAL8 776 aa11.74□□□□□ -0.53
TMEM248-202ENST00000413593 PRAMEF19Q5SWL8 479 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms