RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 SLC43A3Q8NBI5 491 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.38□□□□□ -1.07
LSM8-202ENST00000411938 PHOSPHO2Q8TCD6 241 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 SSH1Q8WYL5 1049 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 ABHD16BQ9H3Z7 469 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 SH2D4AQ9H788 454 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 ARHGEF10LQ9HCE6 1279 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 PIH1D3Q9NQM4 214 aaKnown RBP8.38□□□□□ -1.07
LSM8-202ENST00000411938 FBXO28Q9NVF7 368 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 MYH1P12882 1939 aa8.38□□□□□ -1.07
LSM8-202ENST00000411938 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.37□□□□□ -1.07
LSM8-202ENST00000411938 GRXCR2A6NFK2 248 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 VWA5AO00534 786 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 WDR46O15213 610 aaKnown RBP8.37□□□□□ -1.07
LSM8-202ENST00000411938 RAD21O60216 631 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 IDH1O75874 414 aaKnown RBP8.37□□□□□ -1.07
LSM8-202ENST00000411938 MS4A1P11836 297 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 PSMC6P62333 389 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 CCDC158Q5M9N0 1113 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 TMEM179Q6ZVK1 233 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 CERS3Q8IU89 383 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 FTOQ9C0B1 505 aaKnown RBP eCLIP8.37□□□□□ -1.07
LSM8-202ENST00000411938 VCPKMTQ9H867 229 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 ZNF214Q9UL59 606 aaPredicted RBP8.37□□□□□ -1.07
LSM8-202ENST00000411938 MTUS1Q9ULD2 1270 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 ADAMTS5Q9UNA0 930 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 TMX2Q9Y320 296 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 FOCADQ5VW36 1801 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 WDFY4Q6ZS81 3184 aa8.37□□□□□ -1.07
LSM8-202ENST00000411938 GRIN2DO15399 1336 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 ZEB2O60315 1214 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 GFRA3O60609 400 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 IGSF3O75054 1194 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 SUPT20HL2P0C7V6 817 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 CYP2C9P11712 490 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 ZAP70P43403 619 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 PTPN5P54829 565 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 TNFAIP2Q03169 654 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 ICA1Q05084 483 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 G3BP1Q13283 466 aaKnown RBP eCLIP8.36□□□□□ -1.07
LSM8-202ENST00000411938 FSCN1Q16658 493 aaKnown RBP8.36□□□□□ -1.07
LSM8-202ENST00000411938 PUS10Q3MIT2 529 aaKnown RBP8.36□□□□□ -1.07
LSM8-202ENST00000411938 SNRNP48Q6IEG0 339 aaKnown RBP8.36□□□□□ -1.07
LSM8-202ENST00000411938 ARMCX2Q7L311 632 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 ZNF467Q7Z7K2 595 aaPredicted RBP8.36□□□□□ -1.07
LSM8-202ENST00000411938 SIAH1Q8IUQ4 282 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 TEX13BQ9BXU2 312 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 SEZ6LQ9BYH1 1024 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 AP5M1Q9H0R1 490 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 PPP1R9AQ9ULJ8 1098 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 EPG5Q9HCE0 2579 aa8.36□□□□□ -1.07
LSM8-202ENST00000411938 CFAP54Q96N23 3096 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 TPRP12270 2363 aaKnown RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 LCHNA4D1U4 455 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 H3BQ06 376 aaPredicted RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 DYNC1LI2O43237 492 aaPredicted RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 KCNJ6P48051 423 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 NKX3-2P78367 333 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 EVX2Q03828 476 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 GABPAQ06546 454 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 EP400NLQ6ZTU2 488 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 TLK2Q86UE8 772 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 RETREG2Q8NC44 543 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 PRSS33Q8NF86 280 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 CRBNQ96SW2 442 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 MEIS3Q99687 375 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 UPF3BQ9BZI7 483 aaKnown RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 ALDH8A1Q9H2A2 487 aaPredicted RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 SUGCTQ9HAC7 445 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 TRMT13Q9NUP7 481 aaKnown RBP8.35□□□□□ -1.07
LSM8-202ENST00000411938 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 FAM50BQ9Y247 325 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 RIPK3Q9Y572 518 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 TECTAO75443 2155 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 MCM3APO60318 1980 aa8.35□□□□□ -1.07
LSM8-202ENST00000411938 MYO7AQ13402 2215 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 ASTN1O14525 1302 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 TNKSO95271 1327 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 COL11A1P12107 1806 aaPredicted RBP8.34□□□□□ -1.07
LSM8-202ENST00000411938 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.34□□□□□ -1.07
LSM8-202ENST00000411938 AKR1B1P15121 316 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 RFC2P35250 354 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 ZP2Q05996 745 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 FAM83BQ5T0W9 1011 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 IER5LQ5T953 404 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 CPXCR1Q8N123 301 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 ANKRD35Q8N283 1001 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 REPS2Q8NFH8 660 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 SMC4Q9NTJ3 1288 aa8.34□□□□□ -1.07
LSM8-202ENST00000411938 CTDP1Q9Y5B0 961 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms