RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 APOA5Q6Q788 366 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 SYNE3Q6ZMZ3 975 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 RAB11FIP4Q86YS3 637 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 CTCFLQ8NI51 663 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-207ENST00000411642 BRF1Q92994 677 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
TTC39A-207ENST00000411642 MROH8Q9H579 483 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 IVNS1ABPQ9Y6Y0 642 aa11.73□□□□□ -0.53
TTC39A-207ENST00000411642 KLF18A0A0U1RQI7 1052 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 KIF5BP33176 963 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 FLT3LGP49771 235 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 APOBRQ0VD83 1088 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 TNS4Q8IZW8 715 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 RAET1EQ8TD07 263 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 SOCS4Q8WXH5 440 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 AGXT2Q9BYV1 514 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 BRPF3Q9ULD4 1205 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 CCPG1Q9ULG6 757 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 NAP1L2Q9ULW6 460 aaPredicted RBP11.72□□□□□ -0.53
TTC39A-207ENST00000411642 RIPK3Q9Y572 518 aa11.72□□□□□ -0.53
TTC39A-207ENST00000411642 SLC15A5A6NIM6 579 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 ZBTB43O43298 467 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 ICAM1P05362 532 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 ALAS1P13196 640 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 TAL1P17542 331 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-207ENST00000411642 PTPREP23469 700 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 GRB14Q14449 540 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 CDC37Q16543 378 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-207ENST00000411642 MORN1Q5T089 497 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 FBXL16Q8N461 479 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 IL17RAQ96F46 866 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 JMJD4Q9H9V9 463 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 UPF2Q9HAU5 1272 aaKnown RBP11.71□□□□□ -0.53
TTC39A-207ENST00000411642 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 PDRG1Q9NUG6 133 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 GJD2Q9UKL4 321 aa11.71□□□□□ -0.53
TTC39A-207ENST00000411642 BRCA2P51587 3418 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 GOLGA8BA8MQT2 603 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 STRNO43815 780 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 FCER1AP12319 257 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 CYP2B6P20813 491 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 ADORA2AP29274 412 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 RGS2P41220 211 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 GNAQP50148 359 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 MAP2K5Q13163 448 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 IRF5Q13568 498 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 TOB2Q14106 344 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-207ENST00000411642 RTN1Q16799 776 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 QRICH1Q2TAL8 776 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 TKFCQ3LXA3 575 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 HOMER1Q86YM7 354 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 CHST13Q8NET6 341 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 TRERF1Q96PN7 1200 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 MMP19Q99542 508 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 ACAD9Q9H845 621 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 RNF146Q9NTX7 359 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 FBXO40Q9UH90 709 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 HPS5Q9UPZ3 1129 aa11.7□□□□□ -0.54
TTC39A-207ENST00000411642 CYTH3O43739 400 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 ADCY3O60266 1144 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 GRK4P32298 578 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 METAP2P50579 478 aaKnown RBP eCLIP11.69□□□□□ -0.54
TTC39A-207ENST00000411642 RCAN1P53805 252 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 KCTD2Q14681 263 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 USH1GQ495M9 461 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 USP6NLQ92738 828 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 APBA2Q99767 749 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 SPZ1Q9BXG8 430 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 RBM28Q9NW13 759 aaKnown RBP11.69□□□□□ -0.54
TTC39A-207ENST00000411642 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
TTC39A-207ENST00000411642 NID2Q14112 1375 aa11.68□□□□□ -0.54
TTC39A-207ENST00000411642 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
TTC39A-207ENST00000411642 ZBTB5O15062 677 aa11.68□□□□□ -0.54
TTC39A-207ENST00000411642 PGK2P07205 417 aa11.68□□□□□ -0.54
TTC39A-207ENST00000411642 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
TTC39A-207ENST00000411642 ELNP15502 786 aa11.68□□□□□ -0.54
TTC39A-207ENST00000411642 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
TTC39A-207ENST00000411642 MUM1L1Q5H9M0 696 aa11.68□□□□□ -0.54
TTC39A-207ENST00000411642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms