RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TSHZ3Q63HK5 1081 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 MFSD5Q6N075 450 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ARMCX2Q7L311 632 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 LRRC47Q8N1G4 583 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GPATCH3Q96I76 525 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 FGD4Q96M96 766 aa16.99■□□□□ 0.31
HLA-DQB2-229ENST00000411527 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 M0R2C6 588 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 OAZ1P54368 228 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GJA9P57773 515 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 IFNL3Q8IZI9 196 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 UPF3AQ9H1J1 476 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ZNF576Q9H609 170 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 HOMER2Q9NSB8 354 aa16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB2-229ENST00000411527 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 ARVCFO00192 962 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TSPY3P0CV98 308 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TSPY8P0CW00 308 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 BMP3P12645 472 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CNTN2Q02246 1040 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 PPIGQ13427 754 aaKnown RBP eCLIP16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 C16orf59Q7L2K0 433 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 GMCL1P1Q8NEA9 526 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CDH23Q9H251 3354 aa16.97■□□□□ 0.31
HLA-DQB2-229ENST00000411527 FDX1P10109 184 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CSF2RAP15509 400 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TMEM240Q5SV17 173 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CCDC174Q6PII3 467 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TMEM199Q8N511 208 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 NEDD1Q8NHV4 660 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 PPP1R12CQ9BZL4 782 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 DCTPP1Q9H773 170 aa16.96■□□□□ 0.31
HLA-DQB2-229ENST00000411527 PRUNE2Q8WUY3 3088 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 GRXCR1A8MXD5 290 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 CTAGE5O15320 804 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 TLR3O15455 904 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ACRP10323 421 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 BEX3Q00994 111 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 TFAP4Q01664 338 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 TNFAIP2Q03169 654 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PDE4BQ07343 736 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 LRRFIP1Q32MZ4 808 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 NOL8Q76FK4 1167 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 FAM126BQ8IXS8 530 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 FAM133AQ8N9E0 248 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 CHURC1Q8WUH1 139 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 SYMPKQ92797 1274 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 AGBL1Q96MI9 1066 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 SEC62Q99442 399 aaKnown RBP16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 NACAP1Q9BZK3 213 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 KATNBL1Q9H079 304 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ACAD9Q9H845 621 aa16.95■□□□□ 0.3
HLA-DQB2-229ENST00000411527 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 SLC3A2P08195 630 aaKnown RBP16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PBX2P40425 430 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 STAT2P52630 851 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 IKQ13123 557 aaPredicted RBP16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ZNF365Q70YC5 407 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 USP38Q8NB14 1042 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PBX4Q9BYU1 374 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 RNF146Q9NTX7 359 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 VCANP13611 3396 aa16.94■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 SOWAHBA6NEL2 793 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ASB14A6NK59 587 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 MCCP23508 829 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 CYP2C18P33260 490 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 SLC1A4P43007 532 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 NKX3-2P78367 333 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 RASIP1Q5U651 963 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 STAG1Q8WVM7 1258 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 TRERF1Q96PN7 1200 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 NAPBQ9H115 298 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ZNF536O15090 1300 aa16.93■□□□□ 0.3
HLA-DQB2-229ENST00000411527 CD4P01730 458 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ALAS1P13196 640 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PPARAQ07869 468 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PSRC1Q6PGN9 363 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 CXCL17Q6UXB2 119 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 PPM1EQ8WY54 764 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 GMCL1Q96IK5 515 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 GAS2L1Q99501 681 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 ASTN1O14525 1302 aa16.92■□□□□ 0.3
HLA-DQB2-229ENST00000411527 SNAP25P60880 206 aa16.91■□□□□ 0.3
HLA-DQB2-229ENST00000411527 KCTD1Q719H9 257 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms